Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc87Q8CDL9 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.71□□□□□ -0.37
Ccdc87Q8CDL9 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.71□□□□□ -0.37
Ccdc87Q8CDL9 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.71□□□□□ -0.37
Ccdc87Q8CDL9 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ccdc87Q8CDL9 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc87Q8CDL9 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc87Q8CDL9 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ccdc87Q8CDL9 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc87Q8CDL9 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Ccdc87Q8CDL9 Gm10434-201ENSMUST00000101158 471 ntBASIC12.71□□□□□ -0.37
Ccdc87Q8CDL9 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc87Q8CDL9 Gm14723-201ENSMUST00000118686 215 ntBASIC12.71□□□□□ -0.37
Ccdc87Q8CDL9 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc87Q8CDL9 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.71□□□□□ -0.37
Ccdc87Q8CDL9 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc87Q8CDL9 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.37
Ccdc87Q8CDL9 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc87Q8CDL9 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Ccdc87Q8CDL9 Mir8109-201ENSMUST00000184375 117 ntBASIC12.71□□□□□ -0.37
Ccdc87Q8CDL9 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ccdc87Q8CDL9 Gm44405-201ENSMUST00000198952 126 ntBASIC12.71□□□□□ -0.37
Ccdc87Q8CDL9 Gm43822-201ENSMUST00000200285 476 ntBASIC12.71□□□□□ -0.37
Ccdc87Q8CDL9 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.71□□□□□ -0.37
Ccdc87Q8CDL9 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.71□□□□□ -0.37
Ccdc87Q8CDL9 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ccdc87Q8CDL9 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc87Q8CDL9 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc87Q8CDL9 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc87Q8CDL9 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.71□□□□□ -0.38
Ccdc87Q8CDL9 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc87Q8CDL9 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Ccdc87Q8CDL9 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc87Q8CDL9 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Gm23912-201ENSMUST00000104687 87 ntBASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Gm4986-201ENSMUST00000119731 549 ntBASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Gm13342-201ENSMUST00000121055 207 ntBASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Gm44364-201ENSMUST00000198368 141 ntBASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Gm3961-201ENSMUST00000204425 994 ntBASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Gm7046-201ENSMUST00000221351 977 ntBASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Gm10076-201ENSMUST00000073238 384 ntBASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc87Q8CDL9 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc87Q8CDL9 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms