Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim9Q8C7M3 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim9Q8C7M3 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim9Q8C7M3 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim9Q8C7M3 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim9Q8C7M3 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim9Q8C7M3 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim9Q8C7M3 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trim9Q8C7M3 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim9Q8C7M3 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim9Q8C7M3 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim9Q8C7M3 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim9Q8C7M3 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim9Q8C7M3 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trim9Q8C7M3 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trim9Q8C7M3 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trim9Q8C7M3 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trim9Q8C7M3 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC13.18□□□□□ -0.3
Trim9Q8C7M3 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.18□□□□□ -0.3
Trim9Q8C7M3 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC13.18□□□□□ -0.3
Trim9Q8C7M3 Gm26361-201ENSMUST00000158868 186 ntBASIC13.18□□□□□ -0.3
Trim9Q8C7M3 Gm9034-201ENSMUST00000182071 1005 ntBASIC13.18□□□□□ -0.3
Trim9Q8C7M3 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trim9Q8C7M3 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim9Q8C7M3 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim9Q8C7M3 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.18□□□□□ -0.3
Trim9Q8C7M3 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim9Q8C7M3 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim9Q8C7M3 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.18□□□□□ -0.3
Trim9Q8C7M3 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim9Q8C7M3 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trim9Q8C7M3 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim9Q8C7M3 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trim9Q8C7M3 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim9Q8C7M3 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim9Q8C7M3 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim9Q8C7M3 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.18□□□□□ -0.3
Trim9Q8C7M3 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim9Q8C7M3 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim9Q8C7M3 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim9Q8C7M3 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim9Q8C7M3 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim9Q8C7M3 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim9Q8C7M3 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim9Q8C7M3 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trim9Q8C7M3 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim9Q8C7M3 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim9Q8C7M3 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trim9Q8C7M3 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trim9Q8C7M3 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim9Q8C7M3 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trim9Q8C7M3 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim9Q8C7M3 Gm22133-201ENSMUST00000102082 109 ntBASIC13.17□□□□□ -0.3
Trim9Q8C7M3 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trim9Q8C7M3 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim9Q8C7M3 Gm13996-201ENSMUST00000118456 430 ntBASIC13.17□□□□□ -0.3
Trim9Q8C7M3 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trim9Q8C7M3 Gm8913-201ENSMUST00000209491 641 ntBASIC13.17□□□□□ -0.3
Trim9Q8C7M3 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Trim9Q8C7M3 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Trim9Q8C7M3 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim9Q8C7M3 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim9Q8C7M3 Gm18986-201ENSMUST00000216029 1986 ntBASIC13.17□□□□□ -0.3
Trim9Q8C7M3 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trim9Q8C7M3 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim9Q8C7M3 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim9Q8C7M3 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim9Q8C7M3 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim9Q8C7M3 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.17□□□□□ -0.3
Trim9Q8C7M3 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim9Q8C7M3 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim9Q8C7M3 AC126257.2-201ENSMUST00000215507 2300 ntBASIC13.17□□□□□ -0.3
Trim9Q8C7M3 Gm43242-201ENSMUST00000199507 1776 ntBASIC13.17□□□□□ -0.3
Trim9Q8C7M3 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim9Q8C7M3 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim9Q8C7M3 Gm3836-201ENSMUST00000211377 1613 ntBASIC13.17□□□□□ -0.3
Trim9Q8C7M3 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim9Q8C7M3 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim9Q8C7M3 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trim9Q8C7M3 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim9Q8C7M3 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trim9Q8C7M3 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim9Q8C7M3 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim9Q8C7M3 AC124397.2-201ENSMUST00000225575 2215 ntBASIC13.16□□□□□ -0.3
Trim9Q8C7M3 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim9Q8C7M3 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim9Q8C7M3 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim9Q8C7M3 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim9Q8C7M3 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim9Q8C7M3 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim9Q8C7M3 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim9Q8C7M3 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim9Q8C7M3 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim9Q8C7M3 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim9Q8C7M3 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.16□□□□□ -0.3
Trim9Q8C7M3 Gm17812-201ENSMUST00000204935 318 ntBASIC13.16□□□□□ -0.3
Trim9Q8C7M3 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim9Q8C7M3 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim9Q8C7M3 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim9Q8C7M3 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms