Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Gm14028-201ENSMUST00000117434 479 ntBASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Gm27530-201ENSMUST00000184096 98 ntBASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Gm4959-201ENSMUST00000197271 1044 ntBASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Gm42629-201ENSMUST00000199063 1102 ntBASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Gm35960-201ENSMUST00000202712 767 ntBASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Gm4157-201ENSMUST00000211647 679 ntBASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Gm270-201ENSMUST00000223010 976 ntBASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc60Q8C4J0 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc60Q8C4J0 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ccdc60Q8C4J0 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ccdc60Q8C4J0 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ccdc60Q8C4J0 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ccdc60Q8C4J0 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc60Q8C4J0 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc60Q8C4J0 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc60Q8C4J0 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc60Q8C4J0 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc60Q8C4J0 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Ccdc60Q8C4J0 Gm6039-201ENSMUST00000121667 1250 ntBASIC15.23■□□□□ 0.03
Ccdc60Q8C4J0 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc60Q8C4J0 Gm14441-201ENSMUST00000121960 540 ntBASIC15.23■□□□□ 0.03
Ccdc60Q8C4J0 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc60Q8C4J0 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ccdc60Q8C4J0 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC15.23■□□□□ 0.03
Ccdc60Q8C4J0 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc60Q8C4J0 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
Ccdc60Q8C4J0 Gm8343-201ENSMUST00000182705 994 ntBASIC15.23■□□□□ 0.03
Ccdc60Q8C4J0 Gm43184-201ENSMUST00000197247 542 ntBASIC15.23■□□□□ 0.03
Ccdc60Q8C4J0 Gm18038-201ENSMUST00000197900 485 ntBASIC15.23■□□□□ 0.03
Ccdc60Q8C4J0 Gm19287-201ENSMUST00000203190 358 ntBASIC15.23■□□□□ 0.03
Ccdc60Q8C4J0 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC15.23■□□□□ 0.03
Ccdc60Q8C4J0 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc60Q8C4J0 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc60Q8C4J0 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc60Q8C4J0 Gm43075-201ENSMUST00000198613 3905 ntBASIC15.23■□□□□ 0.03
Ccdc60Q8C4J0 Gm43051-201ENSMUST00000201096 2678 ntBASIC15.23■□□□□ 0.03
Ccdc60Q8C4J0 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ccdc60Q8C4J0 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Ccdc60Q8C4J0 Pck2-205ENSMUST00000226352 2784 ntBASIC15.23■□□□□ 0.03
Ccdc60Q8C4J0 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Ccdc60Q8C4J0 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc60Q8C4J0 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc60Q8C4J0 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc60Q8C4J0 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc60Q8C4J0 Gm9072-201ENSMUST00000218390 1514 ntBASIC15.22■□□□□ 0.03
Ccdc60Q8C4J0 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc60Q8C4J0 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc60Q8C4J0 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc60Q8C4J0 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc60Q8C4J0 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc60Q8C4J0 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc60Q8C4J0 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc60Q8C4J0 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC15.22■□□□□ 0.03
Ccdc60Q8C4J0 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc60Q8C4J0 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC15.22■□□□□ 0.03
Ccdc60Q8C4J0 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc60Q8C4J0 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC15.22■□□□□ 0.03
Ccdc60Q8C4J0 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc60Q8C4J0 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc60Q8C4J0 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Ccdc60Q8C4J0 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc60Q8C4J0 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC15.22■□□□□ 0.03
Ccdc60Q8C4J0 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
Ccdc60Q8C4J0 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc60Q8C4J0 Gm9034-201ENSMUST00000182071 1005 ntBASIC15.22■□□□□ 0.03
Ccdc60Q8C4J0 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc60Q8C4J0 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Ccdc60Q8C4J0 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms