Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ska3Q8C263 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ska3Q8C263 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ska3Q8C263 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ska3Q8C263 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ska3Q8C263 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ska3Q8C263 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Ska3Q8C263 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ska3Q8C263 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ska3Q8C263 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ska3Q8C263 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ska3Q8C263 Gm7722-201ENSMUST00000120646 741 ntBASIC11.29□□□□□ -0.6
Ska3Q8C263 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ska3Q8C263 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ska3Q8C263 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.29□□□□□ -0.6
Ska3Q8C263 Gm5706-201ENSMUST00000181525 993 ntBASIC11.29□□□□□ -0.6
Ska3Q8C263 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.29□□□□□ -0.6
Ska3Q8C263 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.29□□□□□ -0.6
Ska3Q8C263 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.29□□□□□ -0.6
Ska3Q8C263 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.29□□□□□ -0.6
Ska3Q8C263 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ska3Q8C263 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ska3Q8C263 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ska3Q8C263 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.29□□□□□ -0.6
Ska3Q8C263 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ska3Q8C263 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.29□□□□□ -0.6
Ska3Q8C263 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ska3Q8C263 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ska3Q8C263 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ska3Q8C263 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ska3Q8C263 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.29□□□□□ -0.6
Ska3Q8C263 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ska3Q8C263 Map1b-203ENSMUST00000223725 2669 ntBASIC11.29□□□□□ -0.6
Ska3Q8C263 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ska3Q8C263 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.29□□□□□ -0.6
Ska3Q8C263 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ska3Q8C263 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ska3Q8C263 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ska3Q8C263 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ska3Q8C263 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ska3Q8C263 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ska3Q8C263 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ska3Q8C263 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ska3Q8C263 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ska3Q8C263 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ska3Q8C263 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.28□□□□□ -0.6
Ska3Q8C263 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ska3Q8C263 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ska3Q8C263 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ska3Q8C263 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.28□□□□□ -0.6
Ska3Q8C263 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ska3Q8C263 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ska3Q8C263 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ska3Q8C263 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ska3Q8C263 Gm13996-201ENSMUST00000118456 430 ntBASIC11.28□□□□□ -0.6
Ska3Q8C263 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ska3Q8C263 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.28□□□□□ -0.6
Ska3Q8C263 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ska3Q8C263 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ska3Q8C263 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ska3Q8C263 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ska3Q8C263 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.28□□□□□ -0.6
Ska3Q8C263 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.28□□□□□ -0.6
Ska3Q8C263 Gm4857-201ENSMUST00000192718 785 ntBASIC11.28□□□□□ -0.6
Ska3Q8C263 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.28□□□□□ -0.6
Ska3Q8C263 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.28□□□□□ -0.6
Ska3Q8C263 Gm43962-201ENSMUST00000203898 190 ntBASIC11.28□□□□□ -0.6
Ska3Q8C263 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ska3Q8C263 Gm45224-201ENSMUST00000208203 414 ntBASIC11.28□□□□□ -0.6
Ska3Q8C263 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.28□□□□□ -0.6
Ska3Q8C263 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.28□□□□□ -0.6
Ska3Q8C263 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ska3Q8C263 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.28□□□□□ -0.6
Ska3Q8C263 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ska3Q8C263 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ska3Q8C263 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ska3Q8C263 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ska3Q8C263 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ska3Q8C263 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ska3Q8C263 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ska3Q8C263 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ska3Q8C263 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.28□□□□□ -0.6
Ska3Q8C263 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Ska3Q8C263 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ska3Q8C263 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Ska3Q8C263 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ska3Q8C263 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ska3Q8C263 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.27□□□□□ -0.6
Ska3Q8C263 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ska3Q8C263 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Ska3Q8C263 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Ska3Q8C263 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ska3Q8C263 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.6
Ska3Q8C263 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ska3Q8C263 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ska3Q8C263 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ska3Q8C263 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.27□□□□□ -0.6
Ska3Q8C263 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ska3Q8C263 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ska3Q8C263 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms