Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Nup54Q8BTS4 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup54Q8BTS4 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup54Q8BTS4 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.24□□□□□ -0.45
Nup54Q8BTS4 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.24□□□□□ -0.45
Nup54Q8BTS4 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup54Q8BTS4 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup54Q8BTS4 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.24□□□□□ -0.45
Nup54Q8BTS4 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nup54Q8BTS4 Gm4310-201ENSMUST00000177847 889 ntBASIC12.24□□□□□ -0.45
Nup54Q8BTS4 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nup54Q8BTS4 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Nup54Q8BTS4 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.24□□□□□ -0.45
Nup54Q8BTS4 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.24□□□□□ -0.45
Nup54Q8BTS4 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.24□□□□□ -0.45
Nup54Q8BTS4 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup54Q8BTS4 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup54Q8BTS4 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup54Q8BTS4 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup54Q8BTS4 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup54Q8BTS4 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup54Q8BTS4 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.24□□□□□ -0.45
Nup54Q8BTS4 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup54Q8BTS4 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup54Q8BTS4 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup54Q8BTS4 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Gm11663-201ENSMUST00000117888 290 ntBASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Gm12501-201ENSMUST00000119163 529 ntBASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Gm8100-201ENSMUST00000182906 988 ntBASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Gm5733-201ENSMUST00000190232 939 ntBASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Gm2965-201ENSMUST00000198365 343 ntBASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Gm4482-201ENSMUST00000200876 742 ntBASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nup54Q8BTS4 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup54Q8BTS4 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup54Q8BTS4 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.22□□□□□ -0.45
Nup54Q8BTS4 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Gm13035-201ENSMUST00000117496 342 ntBASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.22□□□□□ -0.45
Nup54Q8BTS4 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Gm26461-201ENSMUST00000175064 290 ntBASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Gm6114-201ENSMUST00000182472 968 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms