Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.28□□□□□ -0.6
Atg4bQ8BGE6 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Atg4bQ8BGE6 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.28□□□□□ -0.6
Atg4bQ8BGE6 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Atg4bQ8BGE6 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atg4bQ8BGE6 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Atg4bQ8BGE6 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Atg4bQ8BGE6 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Atg4bQ8BGE6 Gm17812-201ENSMUST00000204935 318 ntBASIC11.28□□□□□ -0.6
Atg4bQ8BGE6 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.28□□□□□ -0.6
Atg4bQ8BGE6 Gm8913-201ENSMUST00000209491 641 ntBASIC11.28□□□□□ -0.6
Atg4bQ8BGE6 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atg4bQ8BGE6 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atg4bQ8BGE6 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Atg4bQ8BGE6 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.28□□□□□ -0.6
Atg4bQ8BGE6 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atg4bQ8BGE6 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.28□□□□□ -0.6
Atg4bQ8BGE6 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Atg4bQ8BGE6 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Atg4bQ8BGE6 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atg4bQ8BGE6 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.28□□□□□ -0.6
Atg4bQ8BGE6 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Atg4bQ8BGE6 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atg4bQ8BGE6 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atg4bQ8BGE6 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Atg4bQ8BGE6 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Atg4bQ8BGE6 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atg4bQ8BGE6 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Atg4bQ8BGE6 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atg4bQ8BGE6 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atg4bQ8BGE6 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.27□□□□□ -0.6
Atg4bQ8BGE6 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Atg4bQ8BGE6 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Atg4bQ8BGE6 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Atg4bQ8BGE6 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Atg4bQ8BGE6 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Atg4bQ8BGE6 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Atg4bQ8BGE6 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.27□□□□□ -0.6
Atg4bQ8BGE6 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Atg4bQ8BGE6 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4bQ8BGE6 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.27□□□□□ -0.61
Atg4bQ8BGE6 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Atg4bQ8BGE6 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4bQ8BGE6 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4bQ8BGE6 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4bQ8BGE6 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Atg4bQ8BGE6 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.27□□□□□ -0.61
Atg4bQ8BGE6 Gm11511-201ENSMUST00000118146 540 ntBASIC11.27□□□□□ -0.61
Atg4bQ8BGE6 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.27□□□□□ -0.61
Atg4bQ8BGE6 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.27□□□□□ -0.61
Atg4bQ8BGE6 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4bQ8BGE6 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.27□□□□□ -0.61
Atg4bQ8BGE6 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.27□□□□□ -0.61
Atg4bQ8BGE6 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.27□□□□□ -0.61
Atg4bQ8BGE6 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.27□□□□□ -0.61
Atg4bQ8BGE6 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.27□□□□□ -0.61
Atg4bQ8BGE6 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Atg4bQ8BGE6 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.27□□□□□ -0.61
Atg4bQ8BGE6 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4bQ8BGE6 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4bQ8BGE6 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Atg4bQ8BGE6 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Atg4bQ8BGE6 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4bQ8BGE6 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.27□□□□□ -0.61
Atg4bQ8BGE6 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4bQ8BGE6 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.27□□□□□ -0.61
Atg4bQ8BGE6 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4bQ8BGE6 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4bQ8BGE6 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4bQ8BGE6 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4bQ8BGE6 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4bQ8BGE6 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Atg4bQ8BGE6 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.27□□□□□ -0.61
Atg4bQ8BGE6 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4bQ8BGE6 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4bQ8BGE6 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atg4bQ8BGE6 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.26□□□□□ -0.61
Atg4bQ8BGE6 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atg4bQ8BGE6 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atg4bQ8BGE6 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atg4bQ8BGE6 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atg4bQ8BGE6 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atg4bQ8BGE6 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Atg4bQ8BGE6 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atg4bQ8BGE6 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.26□□□□□ -0.61
Atg4bQ8BGE6 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Atg4bQ8BGE6 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atg4bQ8BGE6 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atg4bQ8BGE6 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.26□□□□□ -0.61
Atg4bQ8BGE6 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atg4bQ8BGE6 Gm14130-201ENSMUST00000118417 987 ntBASIC11.26□□□□□ -0.61
Atg4bQ8BGE6 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Atg4bQ8BGE6 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.26□□□□□ -0.61
Atg4bQ8BGE6 Gm38241-201ENSMUST00000192641 898 ntBASIC11.26□□□□□ -0.61
Atg4bQ8BGE6 Gm8956-201ENSMUST00000203939 825 ntBASIC11.26□□□□□ -0.61
Atg4bQ8BGE6 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Atg4bQ8BGE6 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Atg4bQ8BGE6 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.26□□□□□ -0.61
Atg4bQ8BGE6 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Atg4bQ8BGE6 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms