Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vrk1Q80X41 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vrk1Q80X41 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Vrk1Q80X41 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vrk1Q80X41 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Vrk1Q80X41 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Vrk1Q80X41 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Vrk1Q80X41 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vrk1Q80X41 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vrk1Q80X41 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.46□□□□□ -0.57
Vrk1Q80X41 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.46□□□□□ -0.57
Vrk1Q80X41 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Vrk1Q80X41 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vrk1Q80X41 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Vrk1Q80X41 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Vrk1Q80X41 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vrk1Q80X41 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vrk1Q80X41 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.46□□□□□ -0.57
Vrk1Q80X41 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vrk1Q80X41 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vrk1Q80X41 Gm15573-201ENSMUST00000119487 540 ntBASIC11.46□□□□□ -0.57
Vrk1Q80X41 Gm12164-201ENSMUST00000121695 551 ntBASIC11.46□□□□□ -0.57
Vrk1Q80X41 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vrk1Q80X41 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Vrk1Q80X41 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC11.46□□□□□ -0.57
Vrk1Q80X41 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Vrk1Q80X41 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.46□□□□□ -0.57
Vrk1Q80X41 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vrk1Q80X41 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.46□□□□□ -0.57
Vrk1Q80X41 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Vrk1Q80X41 Gm9132-201ENSMUST00000210182 832 ntBASIC11.46□□□□□ -0.57
Vrk1Q80X41 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC11.46□□□□□ -0.57
Vrk1Q80X41 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.46□□□□□ -0.57
Vrk1Q80X41 Gm9797-202ENSMUST00000218003 294 ntBASIC11.46□□□□□ -0.57
Vrk1Q80X41 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Vrk1Q80X41 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC11.46□□□□□ -0.57
Vrk1Q80X41 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC11.46□□□□□ -0.57
Vrk1Q80X41 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.46□□□□□ -0.57
Vrk1Q80X41 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vrk1Q80X41 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Vrk1Q80X41 Gm5705-201ENSMUST00000066241 711 ntBASIC11.46□□□□□ -0.57
Vrk1Q80X41 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Vrk1Q80X41 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.46□□□□□ -0.57
Vrk1Q80X41 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Vrk1Q80X41 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Vrk1Q80X41 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Vrk1Q80X41 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Vrk1Q80X41 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Vrk1Q80X41 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Vrk1Q80X41 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Vrk1Q80X41 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
Vrk1Q80X41 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Vrk1Q80X41 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.45□□□□□ -0.58
Vrk1Q80X41 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vrk1Q80X41 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.45□□□□□ -0.58
Vrk1Q80X41 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.45□□□□□ -0.58
Vrk1Q80X41 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC11.45□□□□□ -0.58
Vrk1Q80X41 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.45□□□□□ -0.58
Vrk1Q80X41 Gm45550-201ENSMUST00000209380 946 ntBASIC11.45□□□□□ -0.58
Vrk1Q80X41 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.45□□□□□ -0.58
Vrk1Q80X41 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms