Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Nudcd1Q6PIP5 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Gm13408-201ENSMUST00000119822 798 ntBASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Gm13935-201ENSMUST00000121859 798 ntBASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Gm44100-201ENSMUST00000204329 436 ntBASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Gm5705-201ENSMUST00000066241 711 ntBASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Cog3-203ENSMUST00000227473 4197 ntBASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nudcd1Q6PIP5 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Nudcd1Q6PIP5 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Nudcd1Q6PIP5 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Nudcd1Q6PIP5 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.47
Nudcd1Q6PIP5 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nudcd1Q6PIP5 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Nudcd1Q6PIP5 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Nudcd1Q6PIP5 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.08□□□□□ -0.48
Nudcd1Q6PIP5 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nudcd1Q6PIP5 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nudcd1Q6PIP5 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nudcd1Q6PIP5 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nudcd1Q6PIP5 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nudcd1Q6PIP5 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.08□□□□□ -0.48
Nudcd1Q6PIP5 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nudcd1Q6PIP5 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nudcd1Q6PIP5 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nudcd1Q6PIP5 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nudcd1Q6PIP5 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.08□□□□□ -0.48
Nudcd1Q6PIP5 Gm23251-201ENSMUST00000103773 110 ntBASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms