Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Gm15610-201ENSMUST00000120584 195 ntBASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Gm24548-201ENSMUST00000158650 108 ntBASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scaf4Q6PFF0 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Scaf4Q6PFF0 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Scaf4Q6PFF0 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Scaf4Q6PFF0 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.77□□□□□ -0.52
Scaf4Q6PFF0 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Scaf4Q6PFF0 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Scaf4Q6PFF0 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
Scaf4Q6PFF0 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.77□□□□□ -0.52
Scaf4Q6PFF0 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.77□□□□□ -0.52
Scaf4Q6PFF0 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scaf4Q6PFF0 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scaf4Q6PFF0 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Scaf4Q6PFF0 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scaf4Q6PFF0 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scaf4Q6PFF0 Gm13875-201ENSMUST00000120162 282 ntBASIC11.77□□□□□ -0.53
Scaf4Q6PFF0 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scaf4Q6PFF0 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.77□□□□□ -0.53
Scaf4Q6PFF0 Gm25261-201ENSMUST00000157416 134 ntBASIC11.77□□□□□ -0.53
Scaf4Q6PFF0 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.77□□□□□ -0.53
Scaf4Q6PFF0 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Scaf4Q6PFF0 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Scaf4Q6PFF0 Gm43818-201ENSMUST00000200605 466 ntBASIC11.77□□□□□ -0.53
Scaf4Q6PFF0 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Scaf4Q6PFF0 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.77□□□□□ -0.53
Scaf4Q6PFF0 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.77□□□□□ -0.53
Scaf4Q6PFF0 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Scaf4Q6PFF0 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scaf4Q6PFF0 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scaf4Q6PFF0 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Scaf4Q6PFF0 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Scaf4Q6PFF0 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scaf4Q6PFF0 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scaf4Q6PFF0 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scaf4Q6PFF0 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scaf4Q6PFF0 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scaf4Q6PFF0 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scaf4Q6PFF0 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Scaf4Q6PFF0 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Scaf4Q6PFF0 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scaf4Q6PFF0 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Scaf4Q6PFF0 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms