Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc85bQ6PDY0 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc85bQ6PDY0 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc85bQ6PDY0 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc85bQ6PDY0 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc85bQ6PDY0 Gm13351-201ENSMUST00000118087 414 ntBASIC12.51□□□□□ -0.41
Ccdc85bQ6PDY0 Gm8731-201ENSMUST00000118088 412 ntBASIC12.51□□□□□ -0.41
Ccdc85bQ6PDY0 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.51□□□□□ -0.41
Ccdc85bQ6PDY0 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc85bQ6PDY0 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC12.51□□□□□ -0.41
Ccdc85bQ6PDY0 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc85bQ6PDY0 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC12.51□□□□□ -0.41
Ccdc85bQ6PDY0 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.51□□□□□ -0.41
Ccdc85bQ6PDY0 Gm44958-201ENSMUST00000203734 736 ntBASIC12.51□□□□□ -0.41
Ccdc85bQ6PDY0 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC12.51□□□□□ -0.41
Ccdc85bQ6PDY0 AC165154.1-201ENSMUST00000226661 340 ntBASIC12.51□□□□□ -0.41
Ccdc85bQ6PDY0 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.51□□□□□ -0.41
Ccdc85bQ6PDY0 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Ccdc85bQ6PDY0 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc85bQ6PDY0 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc85bQ6PDY0 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc85bQ6PDY0 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc85bQ6PDY0 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc85bQ6PDY0 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc85bQ6PDY0 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc85bQ6PDY0 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc85bQ6PDY0 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc85bQ6PDY0 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc85bQ6PDY0 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc85bQ6PDY0 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc85bQ6PDY0 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc85bQ6PDY0 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.51□□□□□ -0.41
Ccdc85bQ6PDY0 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc85bQ6PDY0 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc85bQ6PDY0 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc85bQ6PDY0 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Gm12579-201ENSMUST00000118040 783 ntBASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Gm15003-201ENSMUST00000118884 446 ntBASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Gm26368-201ENSMUST00000157826 118 ntBASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Gm37458-201ENSMUST00000194055 410 ntBASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Gm29763-201ENSMUST00000205306 616 ntBASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc85bQ6PDY0 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc85bQ6PDY0 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc85bQ6PDY0 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.49□□□□□ -0.41
Ccdc85bQ6PDY0 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ccdc85bQ6PDY0 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc85bQ6PDY0 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc85bQ6PDY0 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.49□□□□□ -0.41
Ccdc85bQ6PDY0 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc85bQ6PDY0 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.49□□□□□ -0.41
Ccdc85bQ6PDY0 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ccdc85bQ6PDY0 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc85bQ6PDY0 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc85bQ6PDY0 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc85bQ6PDY0 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc85bQ6PDY0 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms