Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC15.35■□□□□ 0.05
Chd4Q6PDQ2 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Chd4Q6PDQ2 Gm4993-201ENSMUST00000118719 1174 ntBASIC15.35■□□□□ 0.05
Chd4Q6PDQ2 Mir7051-201ENSMUST00000184167 73 ntBASIC15.35■□□□□ 0.05
Chd4Q6PDQ2 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC15.35■□□□□ 0.05
Chd4Q6PDQ2 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chd4Q6PDQ2 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chd4Q6PDQ2 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 AC156031.2-201ENSMUST00000213107 3310 ntBASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 Gm25053-201ENSMUST00000103982 133 ntBASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 Gm25922-201ENSMUST00000104281 130 ntBASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 Gm9673-201ENSMUST00000119287 781 ntBASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 Gm24679-201ENSMUST00000158762 111 ntBASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 Gm25053-202ENSMUST00000199731 132 ntBASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 n-R5s211-201ENSMUST00000093689 119 ntBASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 AC108858.2-201ENSMUST00000228186 1425 ntBASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chd4Q6PDQ2 Gm37122-201ENSMUST00000195313 1567 ntBASIC15.33■□□□□ 0.05
Chd4Q6PDQ2 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chd4Q6PDQ2 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Chd4Q6PDQ2 Gm45428-201ENSMUST00000209619 1789 ntBASIC15.33■□□□□ 0.05
Chd4Q6PDQ2 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chd4Q6PDQ2 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chd4Q6PDQ2 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC15.33■□□□□ 0.05
Chd4Q6PDQ2 Gm14219-201ENSMUST00000120414 288 ntBASIC15.33■□□□□ 0.05
Chd4Q6PDQ2 Gm8723-201ENSMUST00000166076 820 ntBASIC15.33■□□□□ 0.05
Chd4Q6PDQ2 Gm8701-201ENSMUST00000169259 874 ntBASIC15.33■□□□□ 0.05
Chd4Q6PDQ2 Gm22877-201ENSMUST00000175451 105 ntBASIC15.33■□□□□ 0.05
Chd4Q6PDQ2 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC15.33■□□□□ 0.05
Chd4Q6PDQ2 Gm9884-201ENSMUST00000194343 1222 ntBASIC15.33■□□□□ 0.05
Chd4Q6PDQ2 Gm42655-201ENSMUST00000202782 1134 ntBASIC15.33■□□□□ 0.05
Chd4Q6PDQ2 Gm18706-201ENSMUST00000210053 1066 ntBASIC15.33■□□□□ 0.05
Chd4Q6PDQ2 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Chd4Q6PDQ2 Gm7959-201ENSMUST00000221823 1078 ntBASIC15.33■□□□□ 0.05
Chd4Q6PDQ2 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chd4Q6PDQ2 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chd4Q6PDQ2 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Chd4Q6PDQ2 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chd4Q6PDQ2 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC15.33■□□□□ 0.04
Chd4Q6PDQ2 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Chd4Q6PDQ2 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Chd4Q6PDQ2 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chd4Q6PDQ2 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chd4Q6PDQ2 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chd4Q6PDQ2 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chd4Q6PDQ2 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chd4Q6PDQ2 Gm6322-201ENSMUST00000118789 1004 ntBASIC15.33■□□□□ 0.04
Chd4Q6PDQ2 Gm11980-201ENSMUST00000121445 986 ntBASIC15.33■□□□□ 0.04
Chd4Q6PDQ2 Gm3828-201ENSMUST00000121817 257 ntBASIC15.33■□□□□ 0.04
Chd4Q6PDQ2 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC15.33■□□□□ 0.04
Chd4Q6PDQ2 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC15.33■□□□□ 0.04
Chd4Q6PDQ2 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC15.33■□□□□ 0.04
Chd4Q6PDQ2 Gm17070-201ENSMUST00000170463 784 ntBASIC15.33■□□□□ 0.04
Chd4Q6PDQ2 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chd4Q6PDQ2 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chd4Q6PDQ2 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chd4Q6PDQ2 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC15.33■□□□□ 0.04
Chd4Q6PDQ2 CT025602.2-201ENSMUST00000226553 772 ntBASIC15.33■□□□□ 0.04
Chd4Q6PDQ2 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chd4Q6PDQ2 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chd4Q6PDQ2 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Chd4Q6PDQ2 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Chd4Q6PDQ2 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Chd4Q6PDQ2 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd4Q6PDQ2 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd4Q6PDQ2 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chd4Q6PDQ2 Gm10305-201ENSMUST00000195331 2475 ntBASIC15.32■□□□□ 0.04
Chd4Q6PDQ2 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15.32■□□□□ 0.04
Chd4Q6PDQ2 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd4Q6PDQ2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms