Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc2Q6PDG5 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc2Q6PDG5 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc2Q6PDG5 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc2Q6PDG5 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc2Q6PDG5 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcc2Q6PDG5 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Smarcc2Q6PDG5 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcc2Q6PDG5 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcc2Q6PDG5 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcc2Q6PDG5 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcc2Q6PDG5 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.97□□□□□ -0.17
Smarcc2Q6PDG5 Cog3-203ENSMUST00000227473 4197 ntBASIC13.97□□□□□ -0.17
Smarcc2Q6PDG5 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcc2Q6PDG5 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.97□□□□□ -0.17
Smarcc2Q6PDG5 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.97□□□□□ -0.17
Smarcc2Q6PDG5 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcc2Q6PDG5 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC13.97□□□□□ -0.17
Smarcc2Q6PDG5 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.97□□□□□ -0.17
Smarcc2Q6PDG5 Gm2260-201ENSMUST00000184965 657 ntBASIC13.97□□□□□ -0.17
Smarcc2Q6PDG5 Gm18893-201ENSMUST00000198416 943 ntBASIC13.97□□□□□ -0.17
Smarcc2Q6PDG5 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcc2Q6PDG5 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.97□□□□□ -0.17
Smarcc2Q6PDG5 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.97□□□□□ -0.17
Smarcc2Q6PDG5 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcc2Q6PDG5 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcc2Q6PDG5 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcc2Q6PDG5 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcc2Q6PDG5 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcc2Q6PDG5 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcc2Q6PDG5 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcc2Q6PDG5 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcc2Q6PDG5 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcc2Q6PDG5 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcc2Q6PDG5 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcc2Q6PDG5 AC164426.2-201ENSMUST00000225993 2492 ntBASIC13.97□□□□□ -0.17
Smarcc2Q6PDG5 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Smarcc2Q6PDG5 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smarcc2Q6PDG5 Gm37542-201ENSMUST00000192563 2832 ntBASIC13.96□□□□□ -0.17
Smarcc2Q6PDG5 Gm37348-201ENSMUST00000193104 1789 ntBASIC13.96□□□□□ -0.17
Smarcc2Q6PDG5 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcc2Q6PDG5 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcc2Q6PDG5 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
Smarcc2Q6PDG5 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcc2Q6PDG5 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcc2Q6PDG5 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.96□□□□□ -0.17
Smarcc2Q6PDG5 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Smarcc2Q6PDG5 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcc2Q6PDG5 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcc2Q6PDG5 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcc2Q6PDG5 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcc2Q6PDG5 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcc2Q6PDG5 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcc2Q6PDG5 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcc2Q6PDG5 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcc2Q6PDG5 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcc2Q6PDG5 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcc2Q6PDG5 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcc2Q6PDG5 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.96□□□□□ -0.17
Smarcc2Q6PDG5 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Smarcc2Q6PDG5 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.96□□□□□ -0.17
Smarcc2Q6PDG5 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcc2Q6PDG5 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcc2Q6PDG5 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Smarcc2Q6PDG5 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.96□□□□□ -0.17
Smarcc2Q6PDG5 Gm5363-201ENSMUST00000211927 938 ntBASIC13.96□□□□□ -0.17
Smarcc2Q6PDG5 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.96□□□□□ -0.17
Smarcc2Q6PDG5 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Smarcc2Q6PDG5 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC13.96□□□□□ -0.17
Smarcc2Q6PDG5 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcc2Q6PDG5 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarcc2Q6PDG5 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smarcc2Q6PDG5 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smarcc2Q6PDG5 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smarcc2Q6PDG5 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smarcc2Q6PDG5 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smarcc2Q6PDG5 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smarcc2Q6PDG5 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Smarcc2Q6PDG5 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Smarcc2Q6PDG5 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcc2Q6PDG5 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcc2Q6PDG5 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcc2Q6PDG5 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcc2Q6PDG5 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcc2Q6PDG5 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcc2Q6PDG5 Gm43773-201ENSMUST00000198548 2162 ntBASIC13.95□□□□□ -0.18
Smarcc2Q6PDG5 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.95□□□□□ -0.18
Smarcc2Q6PDG5 Gm13996-201ENSMUST00000118456 430 ntBASIC13.95□□□□□ -0.18
Smarcc2Q6PDG5 Gm15610-201ENSMUST00000120584 195 ntBASIC13.95□□□□□ -0.18
Smarcc2Q6PDG5 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Smarcc2Q6PDG5 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Smarcc2Q6PDG5 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
Smarcc2Q6PDG5 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Smarcc2Q6PDG5 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcc2Q6PDG5 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC13.95□□□□□ -0.18
Smarcc2Q6PDG5 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC13.95□□□□□ -0.18
Smarcc2Q6PDG5 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.95□□□□□ -0.18
Smarcc2Q6PDG5 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.95□□□□□ -0.18
Smarcc2Q6PDG5 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Smarcc2Q6PDG5 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms