Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sp140Q6NSQ5 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Sp140Q6NSQ5 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sp140Q6NSQ5 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.14□□□□□ -0.47
Sp140Q6NSQ5 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 Gm27046-201ENSMUST00000182160 463 ntBASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sp140Q6NSQ5 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.12□□□□□ -0.47
Sp140Q6NSQ5 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sp140Q6NSQ5 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sp140Q6NSQ5 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sp140Q6NSQ5 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sp140Q6NSQ5 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sp140Q6NSQ5 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms