Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col11a1Q61245 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col11a1Q61245 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC13.13□□□□□ -0.31
Col11a1Q61245 Gm37452-201ENSMUST00000194416 1160 ntBASIC13.13□□□□□ -0.31
Col11a1Q61245 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC13.13□□□□□ -0.31
Col11a1Q61245 Gm18010-201ENSMUST00000203553 202 ntBASIC13.13□□□□□ -0.31
Col11a1Q61245 AC122035.1-201ENSMUST00000227576 1016 ntBASIC13.13□□□□□ -0.31
Col11a1Q61245 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col11a1Q61245 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col11a1Q61245 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col11a1Q61245 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col11a1Q61245 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col11a1Q61245 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col11a1Q61245 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col11a1Q61245 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col11a1Q61245 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col11a1Q61245 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col11a1Q61245 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col11a1Q61245 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col11a1Q61245 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col11a1Q61245 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col11a1Q61245 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col11a1Q61245 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col11a1Q61245 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col11a1Q61245 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Col11a1Q61245 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col11a1Q61245 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Col11a1Q61245 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col11a1Q61245 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col11a1Q61245 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col11a1Q61245 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col11a1Q61245 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Col11a1Q61245 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Col11a1Q61245 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col11a1Q61245 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Col11a1Q61245 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Col11a1Q61245 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Col11a1Q61245 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Col11a1Q61245 Gm11475-201ENSMUST00000118482 476 ntBASIC13.13□□□□□ -0.31
Col11a1Q61245 Gm16219-201ENSMUST00000120096 274 ntBASIC13.13□□□□□ -0.31
Col11a1Q61245 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Col11a1Q61245 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col11a1Q61245 Gm8384-201ENSMUST00000190905 704 ntBASIC13.13□□□□□ -0.31
Col11a1Q61245 Gm2345-201ENSMUST00000193451 589 ntBASIC13.13□□□□□ -0.31
Col11a1Q61245 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Col11a1Q61245 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Col11a1Q61245 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC13.13□□□□□ -0.31
Col11a1Q61245 AC164556.1-201ENSMUST00000221318 751 ntBASIC13.13□□□□□ -0.31
Col11a1Q61245 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Col11a1Q61245 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col11a1Q61245 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col11a1Q61245 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Col11a1Q61245 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col11a1Q61245 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Col11a1Q61245 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC13.13□□□□□ -0.31
Col11a1Q61245 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.13□□□□□ -0.31
Col11a1Q61245 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC13.13□□□□□ -0.31
Col11a1Q61245 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Col11a1Q61245 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.13□□□□□ -0.31
Col11a1Q61245 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col11a1Q61245 Gm42970-201ENSMUST00000196407 1352 ntBASIC13.12□□□□□ -0.31
Col11a1Q61245 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Col11a1Q61245 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col11a1Q61245 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col11a1Q61245 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.12□□□□□ -0.31
Col11a1Q61245 Acot6-202ENSMUST00000222921 3622 ntBASIC13.12□□□□□ -0.31
Col11a1Q61245 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.12□□□□□ -0.31
Col11a1Q61245 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col11a1Q61245 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col11a1Q61245 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col11a1Q61245 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC13.12□□□□□ -0.31
Col11a1Q61245 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Col11a1Q61245 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Col11a1Q61245 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col11a1Q61245 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col11a1Q61245 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col11a1Q61245 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col11a1Q61245 Gm13171-201ENSMUST00000117233 391 ntBASIC13.12□□□□□ -0.31
Col11a1Q61245 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col11a1Q61245 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col11a1Q61245 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC13.12□□□□□ -0.31
Col11a1Q61245 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.12□□□□□ -0.31
Col11a1Q61245 Gm3329-201ENSMUST00000159873 556 ntBASIC13.12□□□□□ -0.31
Col11a1Q61245 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col11a1Q61245 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC13.12□□□□□ -0.31
Col11a1Q61245 Gm31274-201ENSMUST00000197356 229 ntBASIC13.12□□□□□ -0.31
Col11a1Q61245 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col11a1Q61245 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col11a1Q61245 Rps3a2-201ENSMUST00000074245 792 ntBASIC13.12□□□□□ -0.31
Col11a1Q61245 Rps3a3-201ENSMUST00000074680 795 ntBASIC13.12□□□□□ -0.31
Col11a1Q61245 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col11a1Q61245 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col11a1Q61245 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col11a1Q61245 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col11a1Q61245 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col11a1Q61245 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col11a1Q61245 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col11a1Q61245 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col11a1Q61245 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Col11a1Q61245 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms