Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Col12a1Q60847 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.5□□□□□ -0.57
Col12a1Q60847 Gm13505-201ENSMUST00000121666 817 ntBASIC11.5□□□□□ -0.57
Col12a1Q60847 Gm11993-201ENSMUST00000121861 820 ntBASIC11.5□□□□□ -0.57
Col12a1Q60847 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col12a1Q60847 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col12a1Q60847 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col12a1Q60847 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC11.5□□□□□ -0.57
Col12a1Q60847 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC11.5□□□□□ -0.57
Col12a1Q60847 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC11.5□□□□□ -0.57
Col12a1Q60847 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col12a1Q60847 AC107711.4-201ENSMUST00000228948 440 ntBASIC11.5□□□□□ -0.57
Col12a1Q60847 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col12a1Q60847 Gm5507-201ENSMUST00000091897 1008 ntBASIC11.5□□□□□ -0.57
Col12a1Q60847 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col12a1Q60847 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col12a1Q60847 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.5□□□□□ -0.57
Col12a1Q60847 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col12a1Q60847 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col12a1Q60847 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col12a1Q60847 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col12a1Q60847 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col12a1Q60847 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.49□□□□□ -0.57
Col12a1Q60847 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col12a1Q60847 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.49□□□□□ -0.57
Col12a1Q60847 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col12a1Q60847 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Col12a1Q60847 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Col12a1Q60847 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col12a1Q60847 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC11.49□□□□□ -0.57
Col12a1Q60847 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC11.49□□□□□ -0.57
Col12a1Q60847 Gm5996-201ENSMUST00000211110 718 ntBASIC11.49□□□□□ -0.57
Col12a1Q60847 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col12a1Q60847 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col12a1Q60847 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col12a1Q60847 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col12a1Q60847 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col12a1Q60847 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Col12a1Q60847 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Col12a1Q60847 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col12a1Q60847 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col12a1Q60847 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col12a1Q60847 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col12a1Q60847 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col12a1Q60847 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col12a1Q60847 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Col12a1Q60847 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Col12a1Q60847 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.49□□□□□ -0.57
Col12a1Q60847 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col12a1Q60847 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Col12a1Q60847 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col12a1Q60847 Gm7833-201ENSMUST00000183288 990 ntBASIC11.49□□□□□ -0.57
Col12a1Q60847 Gm31274-201ENSMUST00000197356 229 ntBASIC11.49□□□□□ -0.57
Col12a1Q60847 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC11.49□□□□□ -0.57
Col12a1Q60847 AC121567.1-201ENSMUST00000227213 842 ntBASIC11.49□□□□□ -0.57
Col12a1Q60847 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col12a1Q60847 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col12a1Q60847 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col12a1Q60847 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.49□□□□□ -0.57
Col12a1Q60847 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col12a1Q60847 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col12a1Q60847 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col12a1Q60847 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.49□□□□□ -0.57
Col12a1Q60847 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col12a1Q60847 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col12a1Q60847 Psmf1-202ENSMUST00000109869 1384 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Col12a1Q60847 Gm10461-201ENSMUST00000202073 4786 ntBASIC11.49□□□□□ -0.57
Col12a1Q60847 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Col12a1Q60847 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.49□□□□□ -0.57
Col12a1Q60847 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col12a1Q60847 Gm24992-201ENSMUST00000157412 130 ntBASIC11.49□□□□□ -0.57
Col12a1Q60847 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC11.49□□□□□ -0.57
Col12a1Q60847 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Col12a1Q60847 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col12a1Q60847 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Col12a1Q60847 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col12a1Q60847 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col12a1Q60847 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col12a1Q60847 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col12a1Q60847 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Col12a1Q60847 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col12a1Q60847 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.48□□□□□ -0.57
Col12a1Q60847 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col12a1Q60847 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col12a1Q60847 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col12a1Q60847 Gm11540-201ENSMUST00000117457 780 ntBASIC11.48□□□□□ -0.57
Col12a1Q60847 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.48□□□□□ -0.57
Col12a1Q60847 Gm4943-201ENSMUST00000132879 424 ntBASIC11.48□□□□□ -0.57
Col12a1Q60847 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Col12a1Q60847 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.48□□□□□ -0.57
Col12a1Q60847 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC11.48□□□□□ -0.57
Col12a1Q60847 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Col12a1Q60847 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.48□□□□□ -0.57
Col12a1Q60847 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col12a1Q60847 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col12a1Q60847 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col12a1Q60847 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col12a1Q60847 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col12a1Q60847 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col12a1Q60847 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms