Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm37246-201ENSMUST00000192665 835 ntBASIC14.34□□□□□ -0.11
Vps54Q5SPW0 Abhd11os-203ENSMUST00000222613 363 ntBASIC14.34□□□□□ -0.11
Vps54Q5SPW0 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps54Q5SPW0 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps54Q5SPW0 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Vps54Q5SPW0 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Vps54Q5SPW0 AC157950.1-201ENSMUST00000217561 2168 ntBASIC14.34□□□□□ -0.11
Vps54Q5SPW0 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps54Q5SPW0 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vps54Q5SPW0 Gm9333-201ENSMUST00000205452 1323 ntBASIC14.34□□□□□ -0.11
Vps54Q5SPW0 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps54Q5SPW0 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps54Q5SPW0 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vps54Q5SPW0 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps54Q5SPW0 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.33□□□□□ -0.11
Vps54Q5SPW0 AC108858.2-201ENSMUST00000228186 1425 ntBASIC14.33□□□□□ -0.11
Vps54Q5SPW0 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vps54Q5SPW0 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Vps54Q5SPW0 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps54Q5SPW0 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Vps54Q5SPW0 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps54Q5SPW0 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vps54Q5SPW0 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vps54Q5SPW0 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Vps54Q5SPW0 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC14.33□□□□□ -0.12
Vps54Q5SPW0 Gm14724-201ENSMUST00000118400 537 ntBASIC14.33□□□□□ -0.12
Vps54Q5SPW0 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC14.33□□□□□ -0.12
Vps54Q5SPW0 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC14.33□□□□□ -0.12
Vps54Q5SPW0 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Vps54Q5SPW0 Gm8100-201ENSMUST00000182906 988 ntBASIC14.33□□□□□ -0.12
Vps54Q5SPW0 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps54Q5SPW0 Gm4482-201ENSMUST00000200876 742 ntBASIC14.33□□□□□ -0.12
Vps54Q5SPW0 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vps54Q5SPW0 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps54Q5SPW0 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps54Q5SPW0 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps54Q5SPW0 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps54Q5SPW0 AC138329.2-201ENSMUST00000225579 1842 ntBASIC14.33□□□□□ -0.12
Vps54Q5SPW0 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps54Q5SPW0 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps54Q5SPW0 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps54Q5SPW0 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps54Q5SPW0 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps54Q5SPW0 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC14.33□□□□□ -0.12
Vps54Q5SPW0 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.33□□□□□ -0.12
Vps54Q5SPW0 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps54Q5SPW0 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Gm11663-201ENSMUST00000117888 290 ntBASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Gm20426-201ENSMUST00000173657 440 ntBASIC14.32□□□□□ -0.12
Vps54Q5SPW0 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Gm5732-201ENSMUST00000182596 1007 ntBASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Gm38117-201ENSMUST00000194653 939 ntBASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps54Q5SPW0 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps54Q5SPW0 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.31□□□□□ -0.12
Vps54Q5SPW0 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps54Q5SPW0 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms