Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Gm14726-201ENSMUST00000120623 896 ntBASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Mir8109-201ENSMUST00000184375 117 ntBASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Gm21769-201ENSMUST00000211922 111 ntBASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Cts7-204ENSMUST00000225321 1257 ntBASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.28□□□□□ -0.76
Trav5d-4Q5R1F6 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Trav5d-4Q5R1F6 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.76
Trav5d-4Q5R1F6 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Trav5d-4Q5R1F6 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav5d-4Q5R1F6 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav5d-4Q5R1F6 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Trav5d-4Q5R1F6 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.76
Trav5d-4Q5R1F6 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Trav5d-4Q5R1F6 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav5d-4Q5R1F6 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Gm14644-201ENSMUST00000116671 647 ntBASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Gm11989-201ENSMUST00000117240 672 ntBASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Gm11930-201ENSMUST00000117788 190 ntBASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Gm11362-201ENSMUST00000118838 850 ntBASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Gm5070-201ENSMUST00000177599 862 ntBASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Gm5706-201ENSMUST00000181525 993 ntBASIC10.27□□□□□ -0.77
Trav5d-4Q5R1F6 Gm27046-201ENSMUST00000182160 463 ntBASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms