Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Syne3Q4FZC9 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Gm23912-201ENSMUST00000104687 87 ntBASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Gm26083-201ENSMUST00000157904 193 ntBASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Gm44651-201ENSMUST00000207343 372 ntBASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Syne3Q4FZC9 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.71□□□□□ -0.37
Syne3Q4FZC9 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Syne3Q4FZC9 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Syne3Q4FZC9 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Syne3Q4FZC9 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Syne3Q4FZC9 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Syne3Q4FZC9 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Syne3Q4FZC9 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Syne3Q4FZC9 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.71□□□□□ -0.37
Syne3Q4FZC9 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Syne3Q4FZC9 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Syne3Q4FZC9 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Syne3Q4FZC9 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Syne3Q4FZC9 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Syne3Q4FZC9 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Syne3Q4FZC9 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.71□□□□□ -0.37
Syne3Q4FZC9 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.71□□□□□ -0.37
Syne3Q4FZC9 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Syne3Q4FZC9 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Syne3Q4FZC9 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.71□□□□□ -0.37
Syne3Q4FZC9 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.71□□□□□ -0.37
Syne3Q4FZC9 Gm17376-201ENSMUST00000166016 84 ntBASIC12.71□□□□□ -0.37
Syne3Q4FZC9 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.71□□□□□ -0.37
Syne3Q4FZC9 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Syne3Q4FZC9 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.71□□□□□ -0.37
Syne3Q4FZC9 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Syne3Q4FZC9 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.71□□□□□ -0.37
Syne3Q4FZC9 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Syne3Q4FZC9 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.71□□□□□ -0.37
Syne3Q4FZC9 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Syne3Q4FZC9 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.71□□□□□ -0.37
Syne3Q4FZC9 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.71□□□□□ -0.37
Syne3Q4FZC9 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Syne3Q4FZC9 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Syne3Q4FZC9 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Syne3Q4FZC9 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Syne3Q4FZC9 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Syne3Q4FZC9 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Syne3Q4FZC9 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Syne3Q4FZC9 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Syne3Q4FZC9 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.71□□□□□ -0.37
Syne3Q4FZC9 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Syne3Q4FZC9 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Syne3Q4FZC9 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.38
Syne3Q4FZC9 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Syne3Q4FZC9 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Syne3Q4FZC9 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Syne3Q4FZC9 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Syne3Q4FZC9 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms