Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Arhgef40Q3UPH7 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Arhgef40Q3UPH7 AC125108.1-201ENSMUST00000218986 2330 ntBASIC17.31■□□□□ 0.36
Arhgef40Q3UPH7 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Arhgef40Q3UPH7 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Arhgef40Q3UPH7 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Arhgef40Q3UPH7 Gm11500-201ENSMUST00000118237 601 ntBASIC17.31■□□□□ 0.36
Arhgef40Q3UPH7 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC17.31■□□□□ 0.36
Arhgef40Q3UPH7 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Arhgef40Q3UPH7 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Arhgef40Q3UPH7 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Arhgef40Q3UPH7 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Arhgef40Q3UPH7 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Arhgef40Q3UPH7 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC17.31■□□□□ 0.36
Arhgef40Q3UPH7 Gm5870-201ENSMUST00000196461 282 ntBASIC17.31■□□□□ 0.36
Arhgef40Q3UPH7 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Arhgef40Q3UPH7 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC17.31■□□□□ 0.36
Arhgef40Q3UPH7 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Arhgef40Q3UPH7 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Arhgef40Q3UPH7 Gm18986-201ENSMUST00000216029 1986 ntBASIC17.3■□□□□ 0.36
Arhgef40Q3UPH7 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Arhgef40Q3UPH7 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Arhgef40Q3UPH7 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Arhgef40Q3UPH7 AC108858.2-201ENSMUST00000228186 1425 ntBASIC17.3■□□□□ 0.36
Arhgef40Q3UPH7 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Arhgef40Q3UPH7 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Arhgef40Q3UPH7 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Arhgef40Q3UPH7 Gm43773-201ENSMUST00000198548 2162 ntBASIC17.3■□□□□ 0.36
Arhgef40Q3UPH7 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Arhgef40Q3UPH7 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Arhgef40Q3UPH7 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Arhgef40Q3UPH7 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Arhgef40Q3UPH7 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Arhgef40Q3UPH7 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Arhgef40Q3UPH7 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Arhgef40Q3UPH7 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC17.3■□□□□ 0.36
Arhgef40Q3UPH7 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Arhgef40Q3UPH7 Gm12194-201ENSMUST00000117756 1012 ntBASIC17.3■□□□□ 0.36
Arhgef40Q3UPH7 Gm11578-201ENSMUST00000118530 459 ntBASIC17.3■□□□□ 0.36
Arhgef40Q3UPH7 Gm9507-202ENSMUST00000180157 654 ntBASIC17.3■□□□□ 0.36
Arhgef40Q3UPH7 Mir7051-201ENSMUST00000184167 73 ntBASIC17.3■□□□□ 0.36
Arhgef40Q3UPH7 Gm6855-201ENSMUST00000206307 790 ntBASIC17.3■□□□□ 0.36
Arhgef40Q3UPH7 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Arhgef40Q3UPH7 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC17.3■□□□□ 0.36
Arhgef40Q3UPH7 CT010486.3-201ENSMUST00000224555 811 ntBASIC17.3■□□□□ 0.36
Arhgef40Q3UPH7 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Arhgef40Q3UPH7 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Arhgef40Q3UPH7 Gm43334-201ENSMUST00000197740 1318 ntBASIC17.3■□□□□ 0.36
Arhgef40Q3UPH7 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Arhgef40Q3UPH7 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Arhgef40Q3UPH7 Gm45428-201ENSMUST00000209619 1789 ntBASIC17.3■□□□□ 0.36
Arhgef40Q3UPH7 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Arhgef40Q3UPH7 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Arhgef40Q3UPH7 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Arhgef40Q3UPH7 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Arhgef40Q3UPH7 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Arhgef40Q3UPH7 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Arhgef40Q3UPH7 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Arhgef40Q3UPH7 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Arhgef40Q3UPH7 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Arhgef40Q3UPH7 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Arhgef40Q3UPH7 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Arhgef40Q3UPH7 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Arhgef40Q3UPH7 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Arhgef40Q3UPH7 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC17.29■□□□□ 0.36
Arhgef40Q3UPH7 Gm14270-201ENSMUST00000118388 846 ntBASIC17.29■□□□□ 0.36
Arhgef40Q3UPH7 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Arhgef40Q3UPH7 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Arhgef40Q3UPH7 Gm9081-201ENSMUST00000182346 991 ntBASIC17.29■□□□□ 0.36
Arhgef40Q3UPH7 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Arhgef40Q3UPH7 Gm29067-201ENSMUST00000190821 470 ntBASIC17.29■□□□□ 0.36
Arhgef40Q3UPH7 Gm5599-201ENSMUST00000209602 788 ntBASIC17.29■□□□□ 0.36
Arhgef40Q3UPH7 AC154361.2-201ENSMUST00000224747 943 ntBASIC17.29■□□□□ 0.36
Arhgef40Q3UPH7 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Arhgef40Q3UPH7 Gm43463-201ENSMUST00000195967 1803 ntBASIC17.29■□□□□ 0.36
Arhgef40Q3UPH7 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Arhgef40Q3UPH7 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Arhgef40Q3UPH7 Gm44190-201ENSMUST00000205083 1401 ntBASIC17.29■□□□□ 0.36
Arhgef40Q3UPH7 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Arhgef40Q3UPH7 AC165351.1-201ENSMUST00000219078 2020 ntBASIC17.29■□□□□ 0.36
Arhgef40Q3UPH7 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Arhgef40Q3UPH7 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC17.29■□□□□ 0.36
Arhgef40Q3UPH7 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Arhgef40Q3UPH7 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Arhgef40Q3UPH7 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Arhgef40Q3UPH7 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Arhgef40Q3UPH7 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Arhgef40Q3UPH7 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Arhgef40Q3UPH7 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Arhgef40Q3UPH7 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Arhgef40Q3UPH7 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Arhgef40Q3UPH7 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Arhgef40Q3UPH7 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC17.28■□□□□ 0.36
Arhgef40Q3UPH7 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Arhgef40Q3UPH7 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Arhgef40Q3UPH7 Gm14740-201ENSMUST00000118538 1150 ntBASIC17.28■□□□□ 0.36
Arhgef40Q3UPH7 Gm12453-201ENSMUST00000121981 331 ntBASIC17.28■□□□□ 0.36
Arhgef40Q3UPH7 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC17.28■□□□□ 0.36
Arhgef40Q3UPH7 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC17.28■□□□□ 0.36
Arhgef40Q3UPH7 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms