Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Limch1Q3UH68 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Limch1Q3UH68 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Limch1Q3UH68 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Limch1Q3UH68 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Limch1Q3UH68 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Limch1Q3UH68 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Limch1Q3UH68 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Limch1Q3UH68 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Limch1Q3UH68 Gm42943-201ENSMUST00000199676 3242 ntBASIC14.1□□□□□ -0.15
Limch1Q3UH68 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC14.1□□□□□ -0.15
Limch1Q3UH68 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Limch1Q3UH68 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Limch1Q3UH68 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Limch1Q3UH68 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Limch1Q3UH68 Gm45428-201ENSMUST00000209619 1789 ntBASIC14.1□□□□□ -0.15
Limch1Q3UH68 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Limch1Q3UH68 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Limch1Q3UH68 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.1□□□□□ -0.15
Limch1Q3UH68 Gm22334-201ENSMUST00000158070 133 ntBASIC14.1□□□□□ -0.15
Limch1Q3UH68 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Limch1Q3UH68 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Limch1Q3UH68 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC14.1□□□□□ -0.15
Limch1Q3UH68 Gzmn-202ENSMUST00000225535 989 ntBASIC14.1□□□□□ -0.15
Limch1Q3UH68 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.1□□□□□ -0.15
Limch1Q3UH68 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC14.1□□□□□ -0.15
Limch1Q3UH68 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Limch1Q3UH68 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Limch1Q3UH68 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Limch1Q3UH68 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Limch1Q3UH68 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Limch1Q3UH68 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Limch1Q3UH68 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Limch1Q3UH68 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Limch1Q3UH68 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Limch1Q3UH68 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Limch1Q3UH68 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC14.1□□□□□ -0.15
Limch1Q3UH68 Rubie-203ENSMUST00000227803 2430 ntBASIC14.1□□□□□ -0.15
Limch1Q3UH68 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Limch1Q3UH68 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC14.1□□□□□ -0.15
Limch1Q3UH68 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Limch1Q3UH68 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Limch1Q3UH68 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Limch1Q3UH68 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Limch1Q3UH68 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Limch1Q3UH68 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Limch1Q3UH68 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Limch1Q3UH68 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Limch1Q3UH68 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Limch1Q3UH68 AC108858.2-201ENSMUST00000228186 1425 ntBASIC14.09□□□□□ -0.15
Limch1Q3UH68 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Limch1Q3UH68 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Limch1Q3UH68 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Limch1Q3UH68 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Limch1Q3UH68 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Limch1Q3UH68 Gm11331-201ENSMUST00000119764 288 ntBASIC14.09□□□□□ -0.15
Limch1Q3UH68 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC14.09□□□□□ -0.15
Limch1Q3UH68 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Limch1Q3UH68 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC14.09□□□□□ -0.15
Limch1Q3UH68 Gm24514-201ENSMUST00000174961 285 ntBASIC14.09□□□□□ -0.15
Limch1Q3UH68 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Limch1Q3UH68 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Limch1Q3UH68 Gm8959-201ENSMUST00000213150 571 ntBASIC14.09□□□□□ -0.15
Limch1Q3UH68 Gm19994-201ENSMUST00000217086 586 ntBASIC14.09□□□□□ -0.15
Limch1Q3UH68 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.09□□□□□ -0.15
Limch1Q3UH68 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Limch1Q3UH68 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Limch1Q3UH68 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Limch1Q3UH68 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC14.09□□□□□ -0.15
Limch1Q3UH68 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Limch1Q3UH68 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.09□□□□□ -0.15
Limch1Q3UH68 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Limch1Q3UH68 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Limch1Q3UH68 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Limch1Q3UH68 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Limch1Q3UH68 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Limch1Q3UH68 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC14.09□□□□□ -0.15
Limch1Q3UH68 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Limch1Q3UH68 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Limch1Q3UH68 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Limch1Q3UH68 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.09□□□□□ -0.15
Limch1Q3UH68 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Limch1Q3UH68 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Limch1Q3UH68 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Limch1Q3UH68 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Limch1Q3UH68 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Limch1Q3UH68 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC14.08□□□□□ -0.15
Limch1Q3UH68 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Limch1Q3UH68 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Limch1Q3UH68 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC14.08□□□□□ -0.16
Limch1Q3UH68 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Limch1Q3UH68 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Limch1Q3UH68 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Limch1Q3UH68 Gm15172-201ENSMUST00000118945 1046 ntBASIC14.08□□□□□ -0.16
Limch1Q3UH68 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Limch1Q3UH68 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC14.08□□□□□ -0.16
Limch1Q3UH68 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC14.08□□□□□ -0.16
Limch1Q3UH68 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.08□□□□□ -0.16
Limch1Q3UH68 Gm5523-201ENSMUST00000180415 997 ntBASIC14.08□□□□□ -0.16
Limch1Q3UH68 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms