Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Col9a2Q07643 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.95□□□□□ -0.34
Col9a2Q07643 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col9a2Q07643 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.95□□□□□ -0.34
Col9a2Q07643 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col9a2Q07643 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col9a2Q07643 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col9a2Q07643 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Col9a2Q07643 Gm22711-201ENSMUST00000116890 133 ntBASIC12.95□□□□□ -0.34
Col9a2Q07643 Gm15131-201ENSMUST00000119124 595 ntBASIC12.95□□□□□ -0.34
Col9a2Q07643 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.95□□□□□ -0.34
Col9a2Q07643 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col9a2Q07643 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Col9a2Q07643 Gm8459-201ENSMUST00000162504 760 ntBASIC12.95□□□□□ -0.34
Col9a2Q07643 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Col9a2Q07643 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col9a2Q07643 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.95□□□□□ -0.34
Col9a2Q07643 Gm43916-201ENSMUST00000205062 967 ntBASIC12.95□□□□□ -0.34
Col9a2Q07643 Gm44551-201ENSMUST00000208804 171 ntBASIC12.95□□□□□ -0.34
Col9a2Q07643 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col9a2Q07643 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col9a2Q07643 Snora73b-201ENSMUST00000083419 205 ntBASIC12.95□□□□□ -0.34
Col9a2Q07643 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
Col9a2Q07643 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col9a2Q07643 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col9a2Q07643 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col9a2Q07643 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.95□□□□□ -0.34
Col9a2Q07643 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Col9a2Q07643 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col9a2Q07643 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col9a2Q07643 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.95□□□□□ -0.34
Col9a2Q07643 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col9a2Q07643 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col9a2Q07643 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col9a2Q07643 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Col9a2Q07643 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Col9a2Q07643 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Col9a2Q07643 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col9a2Q07643 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col9a2Q07643 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col9a2Q07643 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col9a2Q07643 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col9a2Q07643 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col9a2Q07643 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col9a2Q07643 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.94□□□□□ -0.34
Col9a2Q07643 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col9a2Q07643 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.94□□□□□ -0.34
Col9a2Q07643 Gm11836-201ENSMUST00000121022 441 ntBASIC12.94□□□□□ -0.34
Col9a2Q07643 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.94□□□□□ -0.34
Col9a2Q07643 Gm7666-201ENSMUST00000146631 819 ntBASIC12.94□□□□□ -0.34
Col9a2Q07643 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.94□□□□□ -0.34
Col9a2Q07643 Gm24844-201ENSMUST00000158679 127 ntBASIC12.94□□□□□ -0.34
Col9a2Q07643 Gm8815-201ENSMUST00000173809 620 ntBASIC12.94□□□□□ -0.34
Col9a2Q07643 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.94□□□□□ -0.34
Col9a2Q07643 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.94□□□□□ -0.34
Col9a2Q07643 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col9a2Q07643 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Col9a2Q07643 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Col9a2Q07643 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col9a2Q07643 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.94□□□□□ -0.34
Col9a2Q07643 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col9a2Q07643 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col9a2Q07643 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.94□□□□□ -0.34
Col9a2Q07643 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col9a2Q07643 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Col9a2Q07643 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col9a2Q07643 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col9a2Q07643 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col9a2Q07643 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Col9a2Q07643 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.94□□□□□ -0.34
Col9a2Q07643 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col9a2Q07643 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col9a2Q07643 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col9a2Q07643 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.93□□□□□ -0.34
Col9a2Q07643 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col9a2Q07643 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col9a2Q07643 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Col9a2Q07643 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col9a2Q07643 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col9a2Q07643 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.93□□□□□ -0.34
Col9a2Q07643 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col9a2Q07643 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col9a2Q07643 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col9a2Q07643 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col9a2Q07643 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col9a2Q07643 Gm11434-201ENSMUST00000122379 629 ntBASIC12.93□□□□□ -0.34
Col9a2Q07643 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col9a2Q07643 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.93□□□□□ -0.34
Col9a2Q07643 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.93□□□□□ -0.34
Col9a2Q07643 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.93□□□□□ -0.34
Col9a2Q07643 Gm27390-201ENSMUST00000184516 176 ntBASIC12.93□□□□□ -0.34
Col9a2Q07643 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.93□□□□□ -0.34
Col9a2Q07643 Gm38151-201ENSMUST00000195085 289 ntBASIC12.93□□□□□ -0.34
Col9a2Q07643 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.93□□□□□ -0.34
Col9a2Q07643 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col9a2Q07643 Gm9132-201ENSMUST00000210182 832 ntBASIC12.93□□□□□ -0.34
Col9a2Q07643 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col9a2Q07643 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col9a2Q07643 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col9a2Q07643 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms