Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1sQ02789 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1sQ02789 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Cacna1sQ02789 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Cacna1sQ02789 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1sQ02789 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1sQ02789 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1sQ02789 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC14.8□□□□□ -0.04
Cacna1sQ02789 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1sQ02789 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.8□□□□□ -0.04
Cacna1sQ02789 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1sQ02789 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1sQ02789 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1sQ02789 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1sQ02789 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC14.8□□□□□ -0.04
Cacna1sQ02789 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Cacna1sQ02789 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1sQ02789 Gm8302-201ENSMUST00000119217 852 ntBASIC14.8□□□□□ -0.04
Cacna1sQ02789 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC14.8□□□□□ -0.04
Cacna1sQ02789 Gm7765-201ENSMUST00000182585 974 ntBASIC14.8□□□□□ -0.04
Cacna1sQ02789 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC14.8□□□□□ -0.04
Cacna1sQ02789 Gm43726-201ENSMUST00000199110 775 ntBASIC14.8□□□□□ -0.04
Cacna1sQ02789 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC14.8□□□□□ -0.04
Cacna1sQ02789 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Cacna1sQ02789 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cacna1sQ02789 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1sQ02789 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1sQ02789 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1sQ02789 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1sQ02789 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cacna1sQ02789 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC14.79□□□□□ -0.04
Cacna1sQ02789 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1sQ02789 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1sQ02789 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1sQ02789 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1sQ02789 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Cacna1sQ02789 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1sQ02789 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1sQ02789 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1sQ02789 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1sQ02789 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1sQ02789 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC14.79□□□□□ -0.04
Cacna1sQ02789 Gm4868-201ENSMUST00000164138 789 ntBASIC14.79□□□□□ -0.04
Cacna1sQ02789 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1sQ02789 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Cacna1sQ02789 Gm19013-201ENSMUST00000183895 1222 ntBASIC14.79□□□□□ -0.04
Cacna1sQ02789 Gm19014-201ENSMUST00000184828 1189 ntBASIC14.79□□□□□ -0.04
Cacna1sQ02789 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1sQ02789 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1sQ02789 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1sQ02789 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cacna1sQ02789 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1sQ02789 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1sQ02789 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1sQ02789 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC14.79□□□□□ -0.04
Cacna1sQ02789 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1sQ02789 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1sQ02789 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1sQ02789 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1sQ02789 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cacna1sQ02789 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1sQ02789 Gm38192-201ENSMUST00000194364 1847 ntBASIC14.78□□□□□ -0.04
Cacna1sQ02789 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1sQ02789 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC14.78□□□□□ -0.04
Cacna1sQ02789 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC14.78□□□□□ -0.04
Cacna1sQ02789 Gm26875-201ENSMUST00000181006 950 ntBASIC14.78□□□□□ -0.04
Cacna1sQ02789 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC14.78□□□□□ -0.04
Cacna1sQ02789 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC14.78□□□□□ -0.04
Cacna1sQ02789 AC154213.1-201ENSMUST00000228234 583 ntBASIC14.78□□□□□ -0.04
Cacna1sQ02789 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Cacna1sQ02789 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Cacna1sQ02789 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1sQ02789 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC14.78□□□□□ -0.04
Cacna1sQ02789 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC14.78□□□□□ -0.04
Cacna1sQ02789 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cacna1sQ02789 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Cacna1sQ02789 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1sQ02789 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1sQ02789 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1sQ02789 Grk6-205ENSMUST00000224653 2976 ntBASIC14.78□□□□□ -0.04
Cacna1sQ02789 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Cacna1sQ02789 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1sQ02789 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1sQ02789 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC14.78□□□□□ -0.04
Cacna1sQ02789 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1sQ02789 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC14.78□□□□□ -0.04
Cacna1sQ02789 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC14.78□□□□□ -0.04
Cacna1sQ02789 Gm25343-201ENSMUST00000157460 107 ntBASIC14.78□□□□□ -0.04
Cacna1sQ02789 Gm6612-201ENSMUST00000170777 395 ntBASIC14.78□□□□□ -0.04
Cacna1sQ02789 AC174797.2-201ENSMUST00000225835 165 ntBASIC14.78□□□□□ -0.04
Cacna1sQ02789 AC159002.1-201ENSMUST00000226714 924 ntBASIC14.78□□□□□ -0.04
Cacna1sQ02789 Gm26782-203ENSMUST00000227103 751 ntBASIC14.78□□□□□ -0.04
Cacna1sQ02789 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1sQ02789 Gm6478-201ENSMUST00000099450 742 ntBASIC14.78□□□□□ -0.04
Cacna1sQ02789 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.78□□□□□ -0.04
Cacna1sQ02789 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1sQ02789 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1sQ02789 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1sQ02789 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cacna1sQ02789 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms