Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col1a2Q01149 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col1a2Q01149 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col1a2Q01149 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col1a2Q01149 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col1a2Q01149 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col1a2Q01149 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col1a2Q01149 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col1a2Q01149 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Col1a2Q01149 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col1a2Q01149 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col1a2Q01149 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col1a2Q01149 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Col1a2Q01149 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col1a2Q01149 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC14.89□□□□□ -0.03
Col1a2Q01149 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col1a2Q01149 Gm23272-201ENSMUST00000104053 129 ntBASIC14.89□□□□□ -0.03
Col1a2Q01149 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Col1a2Q01149 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC14.89□□□□□ -0.03
Col1a2Q01149 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC14.89□□□□□ -0.03
Col1a2Q01149 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC14.89□□□□□ -0.03
Col1a2Q01149 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col1a2Q01149 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Col1a2Q01149 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col1a2Q01149 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col1a2Q01149 Gm43852-201ENSMUST00000202098 917 ntBASIC14.89□□□□□ -0.03
Col1a2Q01149 Gm8574-201ENSMUST00000203207 924 ntBASIC14.89□□□□□ -0.03
Col1a2Q01149 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Col1a2Q01149 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC14.89□□□□□ -0.03
Col1a2Q01149 AC165260.2-203ENSMUST00000224237 336 ntBASIC14.89□□□□□ -0.03
Col1a2Q01149 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col1a2Q01149 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC14.89□□□□□ -0.03
Col1a2Q01149 Gm5451-201ENSMUST00000080545 579 ntBASIC14.89□□□□□ -0.03
Col1a2Q01149 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Col1a2Q01149 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.89□□□□□ -0.03
Col1a2Q01149 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col1a2Q01149 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Col1a2Q01149 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col1a2Q01149 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.89□□□□□ -0.03
Col1a2Q01149 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col1a2Q01149 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col1a2Q01149 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col1a2Q01149 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col1a2Q01149 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col1a2Q01149 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col1a2Q01149 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col1a2Q01149 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.89□□□□□ -0.03
Col1a2Q01149 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col1a2Q01149 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC14.89□□□□□ -0.03
Col1a2Q01149 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col1a2Q01149 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col1a2Q01149 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Col1a2Q01149 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col1a2Q01149 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col1a2Q01149 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col1a2Q01149 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC14.88□□□□□ -0.03
Col1a2Q01149 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC14.88□□□□□ -0.03
Col1a2Q01149 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col1a2Q01149 Gm37981-201ENSMUST00000194280 535 ntBASIC14.88□□□□□ -0.03
Col1a2Q01149 AC164437.3-201ENSMUST00000228323 347 ntBASIC14.88□□□□□ -0.03
Col1a2Q01149 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Col1a2Q01149 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col1a2Q01149 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col1a2Q01149 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.88□□□□□ -0.03
Col1a2Q01149 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col1a2Q01149 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col1a2Q01149 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Col1a2Q01149 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col1a2Q01149 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col1a2Q01149 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Col1a2Q01149 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col1a2Q01149 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col1a2Q01149 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col1a2Q01149 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.88□□□□□ -0.03
Col1a2Q01149 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC14.88□□□□□ -0.03
Col1a2Q01149 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col1a2Q01149 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col1a2Q01149 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col1a2Q01149 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col1a2Q01149 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col1a2Q01149 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col1a2Q01149 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col1a2Q01149 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col1a2Q01149 Gm14942-201ENSMUST00000119642 336 ntBASIC14.87□□□□□ -0.03
Col1a2Q01149 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC14.87□□□□□ -0.03
Col1a2Q01149 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Col1a2Q01149 Gm7504-201ENSMUST00000201449 424 ntBASIC14.87□□□□□ -0.03
Col1a2Q01149 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col1a2Q01149 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Col1a2Q01149 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col1a2Q01149 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col1a2Q01149 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col1a2Q01149 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
Col1a2Q01149 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col1a2Q01149 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col1a2Q01149 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col1a2Q01149 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col1a2Q01149 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Col1a2Q01149 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC14.87□□□□□ -0.03
Col1a2Q01149 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms