Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scn1bP97952 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scn1bP97952 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scn1bP97952 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scn1bP97952 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scn1bP97952 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC10.92□□□□□ -0.66
Scn1bP97952 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Scn1bP97952 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scn1bP97952 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC10.92□□□□□ -0.66
Scn1bP97952 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Scn1bP97952 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.92□□□□□ -0.66
Scn1bP97952 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC10.92□□□□□ -0.66
Scn1bP97952 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Scn1bP97952 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.92□□□□□ -0.66
Scn1bP97952 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Scn1bP97952 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scn1bP97952 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.92□□□□□ -0.66
Scn1bP97952 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scn1bP97952 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC10.92□□□□□ -0.66
Scn1bP97952 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.92□□□□□ -0.66
Scn1bP97952 AC159006.1-201ENSMUST00000226396 258 ntBASIC10.92□□□□□ -0.66
Scn1bP97952 AC155252.1-201ENSMUST00000226462 1208 ntBASIC10.92□□□□□ -0.66
Scn1bP97952 AC125117.1-201ENSMUST00000228121 468 ntBASIC10.92□□□□□ -0.66
Scn1bP97952 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scn1bP97952 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scn1bP97952 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scn1bP97952 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scn1bP97952 Gm24136-201ENSMUST00000083374 165 ntBASIC10.92□□□□□ -0.66
Scn1bP97952 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Scn1bP97952 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scn1bP97952 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scn1bP97952 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Scn1bP97952 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scn1bP97952 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Scn1bP97952 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Scn1bP97952 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Scn1bP97952 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Scn1bP97952 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.92□□□□□ -0.66
Scn1bP97952 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scn1bP97952 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scn1bP97952 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Scn1bP97952 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC10.92□□□□□ -0.66
Scn1bP97952 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scn1bP97952 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scn1bP97952 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Scn1bP97952 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scn1bP97952 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scn1bP97952 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Scn1bP97952 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.91□□□□□ -0.66
Scn1bP97952 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Scn1bP97952 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scn1bP97952 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scn1bP97952 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scn1bP97952 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scn1bP97952 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scn1bP97952 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.91□□□□□ -0.66
Scn1bP97952 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Scn1bP97952 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Scn1bP97952 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scn1bP97952 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Scn1bP97952 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scn1bP97952 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Scn1bP97952 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Scn1bP97952 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.91□□□□□ -0.66
Scn1bP97952 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC10.91□□□□□ -0.66
Scn1bP97952 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Scn1bP97952 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Scn1bP97952 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Scn1bP97952 Gm12036-201ENSMUST00000120008 530 ntBASIC10.91□□□□□ -0.66
Scn1bP97952 Gm14928-201ENSMUST00000120198 477 ntBASIC10.91□□□□□ -0.66
Scn1bP97952 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Scn1bP97952 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scn1bP97952 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Scn1bP97952 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scn1bP97952 Gm23363-201ENSMUST00000175024 79 ntBASIC10.91□□□□□ -0.66
Scn1bP97952 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Scn1bP97952 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Scn1bP97952 Gm28911-201ENSMUST00000188837 117 ntBASIC10.91□□□□□ -0.66
Scn1bP97952 Gtpbp10-211ENSMUST00000198799 648 ntBASIC10.91□□□□□ -0.66
Scn1bP97952 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scn1bP97952 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scn1bP97952 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Scn1bP97952 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scn1bP97952 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Scn1bP97952 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scn1bP97952 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scn1bP97952 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scn1bP97952 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.91□□□□□ -0.66
Scn1bP97952 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Scn1bP97952 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Scn1bP97952 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Scn1bP97952 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Scn1bP97952 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.91□□□□□ -0.66
Scn1bP97952 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Scn1bP97952 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Scn1bP97952 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scn1bP97952 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scn1bP97952 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scn1bP97952 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.91□□□□□ -0.66
Scn1bP97952 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms