Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx3-2P97503 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Nkx3-2P97503 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.37□□□□□ -0.59
Nkx3-2P97503 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Nkx3-2P97503 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Nkx3-2P97503 Gm22133-201ENSMUST00000102082 109 ntBASIC11.37□□□□□ -0.59
Nkx3-2P97503 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
Nkx3-2P97503 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Nkx3-2P97503 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
Nkx3-2P97503 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx3-2P97503 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.37□□□□□ -0.59
Nkx3-2P97503 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.37□□□□□ -0.59
Nkx3-2P97503 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx3-2P97503 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Nkx3-2P97503 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Nkx3-2P97503 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.37□□□□□ -0.59
Nkx3-2P97503 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx3-2P97503 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.37□□□□□ -0.59
Nkx3-2P97503 Gm18038-201ENSMUST00000197900 485 ntBASIC11.37□□□□□ -0.59
Nkx3-2P97503 Gm18711-201ENSMUST00000199341 750 ntBASIC11.37□□□□□ -0.59
Nkx3-2P97503 Gm43962-201ENSMUST00000203898 190 ntBASIC11.37□□□□□ -0.59
Nkx3-2P97503 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.37□□□□□ -0.59
Nkx3-2P97503 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.37□□□□□ -0.59
Nkx3-2P97503 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.37□□□□□ -0.59
Nkx3-2P97503 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx3-2P97503 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx3-2P97503 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Nkx3-2P97503 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx3-2P97503 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx3-2P97503 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx3-2P97503 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx3-2P97503 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.37□□□□□ -0.59
Nkx3-2P97503 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx3-2P97503 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx3-2P97503 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx3-2P97503 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx3-2P97503 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx3-2P97503 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx3-2P97503 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx3-2P97503 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Nkx3-2P97503 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.36□□□□□ -0.59
Nkx3-2P97503 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Gm12380-201ENSMUST00000119012 544 ntBASIC11.36□□□□□ -0.59
Nkx3-2P97503 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Gm18734-201ENSMUST00000172937 808 ntBASIC11.36□□□□□ -0.59
Nkx3-2P97503 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.36□□□□□ -0.59
Nkx3-2P97503 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.36□□□□□ -0.59
Nkx3-2P97503 Gm28071-201ENSMUST00000190355 478 ntBASIC11.36□□□□□ -0.59
Nkx3-2P97503 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Gm270-201ENSMUST00000223010 976 ntBASIC11.36□□□□□ -0.59
Nkx3-2P97503 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx3-2P97503 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.36□□□□□ -0.59
Nkx3-2P97503 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx3-2P97503 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx3-2P97503 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx3-2P97503 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx3-2P97503 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.35□□□□□ -0.59
Nkx3-2P97503 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.35□□□□□ -0.59
Nkx3-2P97503 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx3-2P97503 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx3-2P97503 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms