Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Npas1P97459 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Npas1P97459 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Npas1P97459 Gm6992-201ENSMUST00000217973 1607 ntBASIC10.04□□□□□ -0.8
Npas1P97459 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Npas1P97459 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Npas1P97459 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Npas1P97459 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.04□□□□□ -0.8
Npas1P97459 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Npas1P97459 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Npas1P97459 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Npas1P97459 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC10.04□□□□□ -0.8
Npas1P97459 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Npas1P97459 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Npas1P97459 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Npas1P97459 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC10.04□□□□□ -0.8
Npas1P97459 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Npas1P97459 Gm13612-201ENSMUST00000119276 390 ntBASIC10.04□□□□□ -0.8
Npas1P97459 Gm13369-201ENSMUST00000119442 987 ntBASIC10.04□□□□□ -0.8
Npas1P97459 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC10.04□□□□□ -0.8
Npas1P97459 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Npas1P97459 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC10.04□□□□□ -0.8
Npas1P97459 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Npas1P97459 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC10.04□□□□□ -0.8
Npas1P97459 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC10.04□□□□□ -0.8
Npas1P97459 Gm8099-201ENSMUST00000200510 742 ntBASIC10.04□□□□□ -0.8
Npas1P97459 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.04□□□□□ -0.8
Npas1P97459 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC10.04□□□□□ -0.8
Npas1P97459 Gm32025-201ENSMUST00000217960 307 ntBASIC10.04□□□□□ -0.8
Npas1P97459 AC155252.1-201ENSMUST00000226462 1208 ntBASIC10.04□□□□□ -0.8
Npas1P97459 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Npas1P97459 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Npas1P97459 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Npas1P97459 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC10.04□□□□□ -0.8
Npas1P97459 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Npas1P97459 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Npas1P97459 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Npas1P97459 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Npas1P97459 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Npas1P97459 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Npas1P97459 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.04□□□□□ -0.8
Npas1P97459 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
Npas1P97459 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Npas1P97459 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Npas1P97459 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Npas1P97459 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Npas1P97459 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Npas1P97459 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Npas1P97459 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Npas1P97459 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Npas1P97459 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC10.03□□□□□ -0.8
Npas1P97459 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Npas1P97459 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.03□□□□□ -0.8
Npas1P97459 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Npas1P97459 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.03□□□□□ -0.8
Npas1P97459 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.03□□□□□ -0.8
Npas1P97459 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
Npas1P97459 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Npas1P97459 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.03□□□□□ -0.8
Npas1P97459 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Npas1P97459 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Npas1P97459 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.03□□□□□ -0.8
Npas1P97459 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Npas1P97459 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Npas1P97459 Gm37922-201ENSMUST00000195596 455 ntBASIC10.03□□□□□ -0.8
Npas1P97459 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Npas1P97459 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC10.03□□□□□ -0.8
Npas1P97459 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Npas1P97459 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Npas1P97459 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Npas1P97459 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC10.03□□□□□ -0.8
Npas1P97459 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Npas1P97459 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Npas1P97459 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Npas1P97459 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Npas1P97459 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Npas1P97459 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Npas1P97459 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Npas1P97459 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Npas1P97459 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Npas1P97459 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Npas1P97459 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC10.03□□□□□ -0.8
Npas1P97459 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Npas1P97459 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Npas1P97459 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Npas1P97459 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.03□□□□□ -0.8
Npas1P97459 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Npas1P97459 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Npas1P97459 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.03□□□□□ -0.8
Npas1P97459 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Npas1P97459 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Npas1P97459 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Npas1P97459 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Npas1P97459 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Npas1P97459 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Npas1P97459 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Npas1P97459 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Npas1P97459 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms