Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.67□□□□□ -0.7
H3f3aP84244 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3f3aP84244 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.67□□□□□ -0.7
H3f3aP84244 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3f3aP84244 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3f3aP84244 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.67□□□□□ -0.7
H3f3aP84244 Gm45011-201ENSMUST00000207620 2297 ntBASIC10.67□□□□□ -0.7
H3f3aP84244 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3f3aP84244 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3f3aP84244 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
H3f3aP84244 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.67□□□□□ -0.7
H3f3aP84244 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
H3f3aP84244 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.67□□□□□ -0.7
H3f3aP84244 Gm29615-201ENSMUST00000185371 697 ntBASIC10.67□□□□□ -0.7
H3f3aP84244 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.67□□□□□ -0.7
H3f3aP84244 Gm28224-201ENSMUST00000186078 697 ntBASIC10.67□□□□□ -0.7
H3f3aP84244 Gm29001-201ENSMUST00000186177 697 ntBASIC10.67□□□□□ -0.7
H3f3aP84244 Gm28292-201ENSMUST00000186593 697 ntBASIC10.67□□□□□ -0.7
H3f3aP84244 Gm28101-201ENSMUST00000187608 697 ntBASIC10.67□□□□□ -0.7
H3f3aP84244 Gm29076-201ENSMUST00000187689 697 ntBASIC10.67□□□□□ -0.7
H3f3aP84244 Gm28302-201ENSMUST00000187931 697 ntBASIC10.67□□□□□ -0.7
H3f3aP84244 Gm28646-201ENSMUST00000188220 697 ntBASIC10.67□□□□□ -0.7
H3f3aP84244 Gm28205-201ENSMUST00000189177 697 ntBASIC10.67□□□□□ -0.7
H3f3aP84244 Gm29032-201ENSMUST00000189797 697 ntBASIC10.67□□□□□ -0.7
H3f3aP84244 Gm28695-201ENSMUST00000190300 697 ntBASIC10.67□□□□□ -0.7
H3f3aP84244 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.67□□□□□ -0.7
H3f3aP84244 Gm37448-201ENSMUST00000192795 697 ntBASIC10.67□□□□□ -0.7
H3f3aP84244 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3f3aP84244 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3f3aP84244 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3f3aP84244 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3f3aP84244 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3f3aP84244 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
H3f3aP84244 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.67□□□□□ -0.7
H3f3aP84244 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3f3aP84244 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3f3aP84244 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3f3aP84244 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3f3aP84244 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.67□□□□□ -0.7
H3f3aP84244 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3f3aP84244 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.67□□□□□ -0.7
H3f3aP84244 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
H3f3aP84244 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3f3aP84244 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
H3f3aP84244 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3f3aP84244 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H3f3aP84244 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3f3aP84244 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3f3aP84244 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3f3aP84244 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.66□□□□□ -0.7
H3f3aP84244 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3f3aP84244 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3f3aP84244 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3f3aP84244 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
H3f3aP84244 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3f3aP84244 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.66□□□□□ -0.7
H3f3aP84244 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.66□□□□□ -0.7
H3f3aP84244 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3f3aP84244 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3f3aP84244 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3f3aP84244 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
H3f3aP84244 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3f3aP84244 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC10.66□□□□□ -0.7
H3f3aP84244 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
H3f3aP84244 Gm14017-201ENSMUST00000121934 386 ntBASIC10.66□□□□□ -0.7
H3f3aP84244 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
H3f3aP84244 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
H3f3aP84244 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3f3aP84244 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
H3f3aP84244 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
H3f3aP84244 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
H3f3aP84244 Gm27627-201ENSMUST00000183644 150 ntBASIC10.66□□□□□ -0.7
H3f3aP84244 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3f3aP84244 Gm7003-201ENSMUST00000195089 312 ntBASIC10.66□□□□□ -0.7
H3f3aP84244 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC10.66□□□□□ -0.7
H3f3aP84244 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
H3f3aP84244 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC10.66□□□□□ -0.7
H3f3aP84244 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3f3aP84244 AC093022.1-201ENSMUST00000226949 1072 ntBASIC10.66□□□□□ -0.7
H3f3aP84244 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3f3aP84244 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.66□□□□□ -0.7
H3f3aP84244 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3f3aP84244 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3f3aP84244 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3f3aP84244 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3f3aP84244 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3f3aP84244 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3f3aP84244 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
H3f3aP84244 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3f3aP84244 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3f3aP84244 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3f3aP84244 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3f3aP84244 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
H3f3aP84244 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
H3f3aP84244 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
H3f3aP84244 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H3f3aP84244 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.66□□□□□ -0.7
H3f3aP84244 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.65□□□□□ -0.7
H3f3aP84244 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
H3f3aP84244 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms