Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Gm38266-201ENSMUST00000194931 421 ntBASIC12.3□□□□□ -0.44
Msx3P70354 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx3P70354 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.3□□□□□ -0.44
Msx3P70354 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.3□□□□□ -0.44
Msx3P70354 Cts7-204ENSMUST00000225321 1257 ntBASIC12.3□□□□□ -0.44
Msx3P70354 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx3P70354 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Msx3P70354 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Msx3P70354 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Msx3P70354 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx3P70354 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx3P70354 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx3P70354 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Msx3P70354 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx3P70354 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx3P70354 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx3P70354 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Msx3P70354 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Msx3P70354 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Msx3P70354 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.3□□□□□ -0.44
Msx3P70354 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Msx3P70354 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx3P70354 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Msx3P70354 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.3□□□□□ -0.44
Msx3P70354 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Msx3P70354 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Msx3P70354 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx3P70354 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.29□□□□□ -0.44
Msx3P70354 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx3P70354 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx3P70354 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.29□□□□□ -0.44
Msx3P70354 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Msx3P70354 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx3P70354 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Msx3P70354 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.29□□□□□ -0.44
Msx3P70354 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.29□□□□□ -0.44
Msx3P70354 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx3P70354 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx3P70354 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Msx3P70354 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Msx3P70354 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Msx3P70354 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.29□□□□□ -0.44
Msx3P70354 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx3P70354 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.29□□□□□ -0.44
Msx3P70354 Gm6334-201ENSMUST00000207083 228 ntBASIC12.29□□□□□ -0.44
Msx3P70354 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx3P70354 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx3P70354 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx3P70354 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx3P70354 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Msx3P70354 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx3P70354 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx3P70354 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx3P70354 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx3P70354 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Msx3P70354 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.29□□□□□ -0.44
Msx3P70354 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Msx3P70354 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx3P70354 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Msx3P70354 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.29□□□□□ -0.44
Msx3P70354 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx3P70354 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx3P70354 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx3P70354 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Msx3P70354 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msx3P70354 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msx3P70354 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msx3P70354 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msx3P70354 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msx3P70354 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msx3P70354 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.28□□□□□ -0.44
Msx3P70354 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.28□□□□□ -0.44
Msx3P70354 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msx3P70354 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msx3P70354 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.28□□□□□ -0.44
Msx3P70354 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msx3P70354 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.28□□□□□ -0.44
Msx3P70354 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msx3P70354 Gm11511-201ENSMUST00000118146 540 ntBASIC12.28□□□□□ -0.44
Msx3P70354 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.28□□□□□ -0.44
Msx3P70354 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Msx3P70354 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Msx3P70354 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msx3P70354 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.28□□□□□ -0.44
Msx3P70354 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.28□□□□□ -0.44
Msx3P70354 Gm27516-201ENSMUST00000184237 98 ntBASIC12.28□□□□□ -0.44
Msx3P70354 Rprl1-202ENSMUST00000198476 238 ntBASIC12.28□□□□□ -0.44
Msx3P70354 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Msx3P70354 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.28□□□□□ -0.44
Msx3P70354 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.28□□□□□ -0.44
Msx3P70354 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Msx3P70354 Gzmn-202ENSMUST00000225535 989 ntBASIC12.28□□□□□ -0.44
Msx3P70354 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.28□□□□□ -0.44
Msx3P70354 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msx3P70354 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Msx3P70354 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msx3P70354 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msx3P70354 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msx3P70354 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msx3P70354 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms