Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm44364-201ENSMUST00000198368 141 ntBASIC10.53□□□□□ -0.72
Lsm6P62313 Gm18893-201ENSMUST00000198416 943 ntBASIC10.53□□□□□ -0.72
Lsm6P62313 Gm3961-201ENSMUST00000204425 994 ntBASIC10.53□□□□□ -0.72
Lsm6P62313 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm6P62313 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.53□□□□□ -0.72
Lsm6P62313 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC10.53□□□□□ -0.72
Lsm6P62313 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC10.53□□□□□ -0.72
Lsm6P62313 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.53□□□□□ -0.72
Lsm6P62313 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.53□□□□□ -0.72
Lsm6P62313 AC122371.3-201ENSMUST00000223402 1061 ntBASIC10.53□□□□□ -0.72
Lsm6P62313 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm6P62313 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm6P62313 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm6P62313 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm6P62313 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm6P62313 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm6P62313 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm6P62313 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm6P62313 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC10.53□□□□□ -0.72
Lsm6P62313 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm6P62313 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm6P62313 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Lsm6P62313 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm6P62313 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
Lsm6P62313 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm6P62313 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm6P62313 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm6P62313 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm6P62313 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm6P62313 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm6P62313 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm6P62313 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm6P62313 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lsm6P62313 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC10.53□□□□□ -0.72
Lsm6P62313 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Lsm6P62313 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Lsm6P62313 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Lsm6P62313 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Lsm6P62313 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Lsm6P62313 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.52□□□□□ -0.72
Lsm6P62313 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Lsm6P62313 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Lsm6P62313 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm6P62313 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.52□□□□□ -0.73
Lsm6P62313 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm6P62313 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.52□□□□□ -0.73
Lsm6P62313 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
Lsm6P62313 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Lsm6P62313 Gm11511-201ENSMUST00000118146 540 ntBASIC10.52□□□□□ -0.73
Lsm6P62313 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm6P62313 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC10.52□□□□□ -0.73
Lsm6P62313 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm6P62313 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm6P62313 Mir8109-201ENSMUST00000184375 117 ntBASIC10.52□□□□□ -0.73
Lsm6P62313 Gm7895-201ENSMUST00000187459 1173 ntBASIC10.52□□□□□ -0.73
Lsm6P62313 Rprl1-202ENSMUST00000198476 238 ntBASIC10.52□□□□□ -0.73
Lsm6P62313 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm6P62313 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC10.52□□□□□ -0.73
Lsm6P62313 Gm45598-202ENSMUST00000210719 986 ntBASIC10.52□□□□□ -0.73
Lsm6P62313 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.52□□□□□ -0.73
Lsm6P62313 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm6P62313 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm6P62313 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm6P62313 Gm9899-201ENSMUST00000065519 555 ntBASIC10.52□□□□□ -0.73
Lsm6P62313 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm6P62313 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm6P62313 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm6P62313 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm6P62313 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm6P62313 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm6P62313 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.52□□□□□ -0.73
Lsm6P62313 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.52□□□□□ -0.73
Lsm6P62313 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm6P62313 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm6P62313 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm6P62313 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Lsm6P62313 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm6P62313 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Lsm6P62313 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.52□□□□□ -0.73
Lsm6P62313 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm6P62313 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm6P62313 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Lsm6P62313 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC10.52□□□□□ -0.73
Lsm6P62313 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lsm6P62313 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lsm6P62313 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Lsm6P62313 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lsm6P62313 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Lsm6P62313 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lsm6P62313 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lsm6P62313 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.51□□□□□ -0.73
Lsm6P62313 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lsm6P62313 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Lsm6P62313 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lsm6P62313 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lsm6P62313 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Lsm6P62313 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lsm6P62313 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lsm6P62313 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Lsm6P62313 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms