Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm28760-201ENSMUST00000185995 736 ntBASIC10.85□□□□□ -0.67
Lsm3P62311 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.85□□□□□ -0.67
Lsm3P62311 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lsm3P62311 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.85□□□□□ -0.67
Lsm3P62311 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Lsm3P62311 Gm7730-201ENSMUST00000212486 454 ntBASIC10.85□□□□□ -0.67
Lsm3P62311 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Lsm3P62311 Cdk7-205ENSMUST00000225990 1159 ntBASIC10.85□□□□□ -0.67
Lsm3P62311 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lsm3P62311 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Lsm3P62311 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lsm3P62311 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lsm3P62311 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Lsm3P62311 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lsm3P62311 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.85□□□□□ -0.67
Lsm3P62311 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Lsm3P62311 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Lsm3P62311 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Lsm3P62311 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Lsm3P62311 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Lsm3P62311 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Lsm3P62311 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lsm3P62311 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lsm3P62311 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Lsm3P62311 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm3P62311 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm3P62311 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC10.84□□□□□ -0.67
Lsm3P62311 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm3P62311 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC10.84□□□□□ -0.67
Lsm3P62311 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm3P62311 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm3P62311 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Lsm3P62311 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.84□□□□□ -0.67
Lsm3P62311 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm3P62311 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Lsm3P62311 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm3P62311 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm3P62311 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm3P62311 Gm14822-201ENSMUST00000122247 291 ntBASIC10.84□□□□□ -0.67
Lsm3P62311 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC10.84□□□□□ -0.67
Lsm3P62311 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm3P62311 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm3P62311 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Lsm3P62311 AC124732.2-201ENSMUST00000221977 316 ntBASIC10.84□□□□□ -0.67
Lsm3P62311 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm3P62311 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Lsm3P62311 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm3P62311 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm3P62311 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Lsm3P62311 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm3P62311 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm3P62311 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm3P62311 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm3P62311 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.84□□□□□ -0.67
Lsm3P62311 AC154171.2-201ENSMUST00000225219 2652 ntBASIC10.84□□□□□ -0.67
Lsm3P62311 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm3P62311 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Lsm3P62311 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm3P62311 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm3P62311 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm3P62311 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Lsm3P62311 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Lsm3P62311 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm3P62311 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm3P62311 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm3P62311 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm3P62311 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm3P62311 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lsm3P62311 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Lsm3P62311 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Lsm3P62311 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Lsm3P62311 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.83□□□□□ -0.68
Lsm3P62311 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Lsm3P62311 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm3P62311 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm3P62311 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm3P62311 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm3P62311 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Lsm3P62311 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.83□□□□□ -0.68
Lsm3P62311 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm3P62311 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm3P62311 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm3P62311 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm3P62311 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Lsm3P62311 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC10.83□□□□□ -0.68
Lsm3P62311 Gm11439-201ENSMUST00000118598 409 ntBASIC10.83□□□□□ -0.68
Lsm3P62311 Gm12036-201ENSMUST00000120008 530 ntBASIC10.83□□□□□ -0.68
Lsm3P62311 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC10.83□□□□□ -0.68
Lsm3P62311 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Lsm3P62311 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC10.83□□□□□ -0.68
Lsm3P62311 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC10.83□□□□□ -0.68
Lsm3P62311 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Lsm3P62311 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.83□□□□□ -0.68
Lsm3P62311 Chchd1-203ENSMUST00000224633 557 ntBASIC10.83□□□□□ -0.68
Lsm3P62311 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm3P62311 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm3P62311 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC10.83□□□□□ -0.68
Lsm3P62311 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Lsm3P62311 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lsm3P62311 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms