Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC9.66□□□□□ -0.86
Sssca1P56873 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sssca1P56873 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Sssca1P56873 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sssca1P56873 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sssca1P56873 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sssca1P56873 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC9.66□□□□□ -0.86
Sssca1P56873 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sssca1P56873 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC9.66□□□□□ -0.86
Sssca1P56873 Gm18782-201ENSMUST00000209023 1399 ntBASIC9.66□□□□□ -0.86
Sssca1P56873 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sssca1P56873 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Sssca1P56873 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC9.66□□□□□ -0.86
Sssca1P56873 Gm43579-201ENSMUST00000202387 1307 ntBASIC9.66□□□□□ -0.86
Sssca1P56873 Gm5620-201ENSMUST00000077991 1348 ntBASIC9.66□□□□□ -0.86
Sssca1P56873 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
Sssca1P56873 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC9.66□□□□□ -0.86
Sssca1P56873 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC9.66□□□□□ -0.86
Sssca1P56873 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC9.66□□□□□ -0.86
Sssca1P56873 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC9.66□□□□□ -0.86
Sssca1P56873 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Sssca1P56873 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC9.66□□□□□ -0.86
Sssca1P56873 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Sssca1P56873 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC9.66□□□□□ -0.86
Sssca1P56873 Gm43818-201ENSMUST00000200605 466 ntBASIC9.66□□□□□ -0.86
Sssca1P56873 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC9.66□□□□□ -0.86
Sssca1P56873 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Sssca1P56873 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Sssca1P56873 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC9.66□□□□□ -0.86
Sssca1P56873 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC9.66□□□□□ -0.86
Sssca1P56873 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sssca1P56873 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sssca1P56873 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sssca1P56873 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sssca1P56873 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sssca1P56873 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sssca1P56873 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sssca1P56873 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sssca1P56873 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Sssca1P56873 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sssca1P56873 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sssca1P56873 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Sssca1P56873 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Sssca1P56873 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sssca1P56873 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sssca1P56873 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sssca1P56873 Gm8706-201ENSMUST00000197372 1491 ntBASIC9.66□□□□□ -0.86
Sssca1P56873 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sssca1P56873 Zscan30-202ENSMUST00000224144 1458 ntBASIC9.66□□□□□ -0.86
Sssca1P56873 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Sssca1P56873 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Sssca1P56873 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Sssca1P56873 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Sssca1P56873 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Sssca1P56873 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Sssca1P56873 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Sssca1P56873 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Sssca1P56873 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Sssca1P56873 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC9.65□□□□□ -0.86
Sssca1P56873 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Sssca1P56873 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Sssca1P56873 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
Sssca1P56873 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Sssca1P56873 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Sssca1P56873 Gm2128-201ENSMUST00000108009 2560 ntBASIC9.65□□□□□ -0.86
Sssca1P56873 Gm15172-201ENSMUST00000118945 1046 ntBASIC9.65□□□□□ -0.86
Sssca1P56873 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC9.65□□□□□ -0.86
Sssca1P56873 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC9.65□□□□□ -0.86
Sssca1P56873 Gm16177-201ENSMUST00000120728 718 ntBASIC9.65□□□□□ -0.86
Sssca1P56873 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC9.65□□□□□ -0.86
Sssca1P56873 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC9.65□□□□□ -0.86
Sssca1P56873 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Sssca1P56873 Gm42693-201ENSMUST00000196779 631 ntBASIC9.65□□□□□ -0.86
Sssca1P56873 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Sssca1P56873 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Sssca1P56873 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Sssca1P56873 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Sssca1P56873 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Sssca1P56873 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Sssca1P56873 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Sssca1P56873 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Sssca1P56873 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Sssca1P56873 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Sssca1P56873 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Sssca1P56873 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Sssca1P56873 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
Sssca1P56873 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Sssca1P56873 Gm13142-201ENSMUST00000117213 1453 ntBASIC9.65□□□□□ -0.87
Sssca1P56873 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
Sssca1P56873 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC9.65□□□□□ -0.87
Sssca1P56873 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC9.65□□□□□ -0.87
Sssca1P56873 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Sssca1P56873 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Sssca1P56873 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Sssca1P56873 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Sssca1P56873 Gm38194-201ENSMUST00000194529 2211 ntBASIC9.64□□□□□ -0.87
Sssca1P56873 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sssca1P56873 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sssca1P56873 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sssca1P56873 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms