Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cdkn2bP55271 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdkn2bP55271 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdkn2bP55271 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdkn2bP55271 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Cdkn2bP55271 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdkn2bP55271 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdkn2bP55271 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdkn2bP55271 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdkn2bP55271 Gm22018-201ENSMUST00000104357 131 ntBASIC11.43□□□□□ -0.58
Cdkn2bP55271 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdkn2bP55271 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdkn2bP55271 Gm13226-201ENSMUST00000117838 404 ntBASIC11.43□□□□□ -0.58
Cdkn2bP55271 Gm11439-201ENSMUST00000118598 409 ntBASIC11.43□□□□□ -0.58
Cdkn2bP55271 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.43□□□□□ -0.58
Cdkn2bP55271 Gm7722-201ENSMUST00000120646 741 ntBASIC11.43□□□□□ -0.58
Cdkn2bP55271 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdkn2bP55271 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdkn2bP55271 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.43□□□□□ -0.58
Cdkn2bP55271 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.43□□□□□ -0.58
Cdkn2bP55271 Gm27514-201ENSMUST00000183692 110 ntBASIC11.43□□□□□ -0.58
Cdkn2bP55271 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.43□□□□□ -0.58
Cdkn2bP55271 Gm45784-201ENSMUST00000188360 142 ntBASIC11.43□□□□□ -0.58
Cdkn2bP55271 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdkn2bP55271 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.43□□□□□ -0.58
Cdkn2bP55271 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.43□□□□□ -0.58
Cdkn2bP55271 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.43□□□□□ -0.58
Cdkn2bP55271 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdkn2bP55271 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdkn2bP55271 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.43□□□□□ -0.58
Cdkn2bP55271 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdkn2bP55271 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Cdkn2bP55271 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdkn2bP55271 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.43□□□□□ -0.58
Cdkn2bP55271 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdkn2bP55271 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdkn2bP55271 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdkn2bP55271 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdkn2bP55271 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdkn2bP55271 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Cdkn2bP55271 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdkn2bP55271 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.42□□□□□ -0.58
Cdkn2bP55271 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.42□□□□□ -0.58
Cdkn2bP55271 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdkn2bP55271 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Cdkn2bP55271 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.42□□□□□ -0.58
Cdkn2bP55271 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.42□□□□□ -0.58
Cdkn2bP55271 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.42□□□□□ -0.58
Cdkn2bP55271 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Gm5950-201ENSMUST00000213337 772 ntBASIC11.42□□□□□ -0.58
Cdkn2bP55271 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.42□□□□□ -0.58
Cdkn2bP55271 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdkn2bP55271 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.42□□□□□ -0.58
Cdkn2bP55271 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdkn2bP55271 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.42□□□□□ -0.58
Cdkn2bP55271 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdkn2bP55271 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdkn2bP55271 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cdkn2bP55271 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdkn2bP55271 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms