Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fdft1P53798 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fdft1P53798 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Fdft1P53798 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fdft1P53798 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Fdft1P53798 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Fdft1P53798 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fdft1P53798 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fdft1P53798 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Fdft1P53798 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fdft1P53798 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fdft1P53798 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fdft1P53798 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fdft1P53798 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.98□□□□□ -0.49
Fdft1P53798 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.98□□□□□ -0.49
Fdft1P53798 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fdft1P53798 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Fdft1P53798 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Fdft1P53798 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fdft1P53798 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Fdft1P53798 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fdft1P53798 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fdft1P53798 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.97□□□□□ -0.49
Fdft1P53798 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fdft1P53798 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Fdft1P53798 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fdft1P53798 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fdft1P53798 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Fdft1P53798 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fdft1P53798 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Fdft1P53798 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Fdft1P53798 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Fdft1P53798 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Fdft1P53798 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Fdft1P53798 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Fdft1P53798 Gm12241-201ENSMUST00000118330 726 ntBASIC11.97□□□□□ -0.49
Fdft1P53798 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.97□□□□□ -0.49
Fdft1P53798 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Fdft1P53798 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Fdft1P53798 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.97□□□□□ -0.49
Fdft1P53798 Gm27516-201ENSMUST00000184237 98 ntBASIC11.97□□□□□ -0.49
Fdft1P53798 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.97□□□□□ -0.49
Fdft1P53798 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.97□□□□□ -0.49
Fdft1P53798 Gm30285-201ENSMUST00000214614 422 ntBASIC11.97□□□□□ -0.49
Fdft1P53798 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fdft1P53798 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fdft1P53798 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.97□□□□□ -0.49
Fdft1P53798 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fdft1P53798 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Fdft1P53798 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fdft1P53798 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Fdft1P53798 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fdft1P53798 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Fdft1P53798 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Fdft1P53798 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.97□□□□□ -0.49
Fdft1P53798 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fdft1P53798 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Fdft1P53798 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fdft1P53798 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Fdft1P53798 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.97□□□□□ -0.49
Fdft1P53798 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Fdft1P53798 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fdft1P53798 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Fdft1P53798 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Fdft1P53798 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fdft1P53798 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Fdft1P53798 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fdft1P53798 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Fdft1P53798 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.97□□□□□ -0.49
Fdft1P53798 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fdft1P53798 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Fdft1P53798 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fdft1P53798 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fdft1P53798 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.49
Fdft1P53798 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fdft1P53798 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.96□□□□□ -0.49
Fdft1P53798 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Fdft1P53798 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Fdft1P53798 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fdft1P53798 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Fdft1P53798 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fdft1P53798 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Fdft1P53798 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Fdft1P53798 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
Fdft1P53798 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Fdft1P53798 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fdft1P53798 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fdft1P53798 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Fdft1P53798 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.96□□□□□ -0.49
Fdft1P53798 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.96□□□□□ -0.49
Fdft1P53798 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Fdft1P53798 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.96□□□□□ -0.49
Fdft1P53798 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Fdft1P53798 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.96□□□□□ -0.49
Fdft1P53798 Gm6334-201ENSMUST00000207083 228 ntBASIC11.96□□□□□ -0.49
Fdft1P53798 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.96□□□□□ -0.49
Fdft1P53798 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.96□□□□□ -0.49
Fdft1P53798 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Fdft1P53798 Gm9368-201ENSMUST00000219348 831 ntBASIC11.96□□□□□ -0.49
Fdft1P53798 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms