Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox1P53783 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.24□□□□□ -0.45
Sox1P53783 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.24□□□□□ -0.45
Sox1P53783 Gm12736-201ENSMUST00000119330 236 ntBASIC12.24□□□□□ -0.45
Sox1P53783 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox1P53783 Gm22388-201ENSMUST00000158194 248 ntBASIC12.24□□□□□ -0.45
Sox1P53783 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox1P53783 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox1P53783 Gm4775-201ENSMUST00000169588 402 ntBASIC12.24□□□□□ -0.45
Sox1P53783 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC12.24□□□□□ -0.45
Sox1P53783 Gm38007-201ENSMUST00000192187 313 ntBASIC12.24□□□□□ -0.45
Sox1P53783 Gm6606-201ENSMUST00000193613 947 ntBASIC12.24□□□□□ -0.45
Sox1P53783 Gm37452-201ENSMUST00000194416 1160 ntBASIC12.24□□□□□ -0.45
Sox1P53783 Gm8574-201ENSMUST00000203207 924 ntBASIC12.24□□□□□ -0.45
Sox1P53783 AC159810.1-201ENSMUST00000214838 1480 ntBASIC12.24□□□□□ -0.45
Sox1P53783 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC12.24□□□□□ -0.45
Sox1P53783 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Sox1P53783 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC12.24□□□□□ -0.45
Sox1P53783 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox1P53783 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox1P53783 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox1P53783 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox1P53783 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox1P53783 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Sox1P53783 Gm8181-201ENSMUST00000062242 669 ntBASIC12.24□□□□□ -0.45
Sox1P53783 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Sox1P53783 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Sox1P53783 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Sox1P53783 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC12.24□□□□□ -0.45
Sox1P53783 Gm10580-201ENSMUST00000097985 396 ntBASIC12.24□□□□□ -0.45
Sox1P53783 Gm10581-201ENSMUST00000097986 231 ntBASIC12.24□□□□□ -0.45
Sox1P53783 Gm10582-201ENSMUST00000097987 396 ntBASIC12.24□□□□□ -0.45
Sox1P53783 Gm10583-201ENSMUST00000097988 396 ntBASIC12.24□□□□□ -0.45
Sox1P53783 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox1P53783 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.24□□□□□ -0.45
Sox1P53783 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox1P53783 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox1P53783 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox1P53783 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox1P53783 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox1P53783 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox1P53783 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Sox1P53783 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox1P53783 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox1P53783 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox1P53783 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox1P53783 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox1P53783 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox1P53783 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox1P53783 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC12.23□□□□□ -0.45
Sox1P53783 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox1P53783 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Sox1P53783 Gm24231-201ENSMUST00000104315 133 ntBASIC12.23□□□□□ -0.45
Sox1P53783 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Sox1P53783 Gm15004-201ENSMUST00000119192 630 ntBASIC12.23□□□□□ -0.45
Sox1P53783 Gm9673-201ENSMUST00000119287 781 ntBASIC12.23□□□□□ -0.45
Sox1P53783 Gm5395-201ENSMUST00000121650 915 ntBASIC12.23□□□□□ -0.45
Sox1P53783 Gm25830-201ENSMUST00000158923 132 ntBASIC12.23□□□□□ -0.45
Sox1P53783 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Sox1P53783 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox1P53783 Gm8384-201ENSMUST00000190905 704 ntBASIC12.23□□□□□ -0.45
Sox1P53783 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox1P53783 AC162932.1-201ENSMUST00000219209 872 ntBASIC12.23□□□□□ -0.45
Sox1P53783 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox1P53783 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Sox1P53783 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox1P53783 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox1P53783 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox1P53783 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Sox1P53783 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.23□□□□□ -0.45
Sox1P53783 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox1P53783 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.23□□□□□ -0.45
Sox1P53783 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Sox1P53783 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox1P53783 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Sox1P53783 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox1P53783 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.23□□□□□ -0.45
Sox1P53783 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox1P53783 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox1P53783 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox1P53783 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox1P53783 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.22□□□□□ -0.45
Sox1P53783 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox1P53783 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox1P53783 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox1P53783 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox1P53783 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox1P53783 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox1P53783 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC12.22□□□□□ -0.45
Sox1P53783 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox1P53783 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.22□□□□□ -0.45
Sox1P53783 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox1P53783 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.22□□□□□ -0.45
Sox1P53783 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox1P53783 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox1P53783 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.22□□□□□ -0.45
Sox1P53783 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Sox1P53783 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC12.22□□□□□ -0.45
Sox1P53783 Gm15707-201ENSMUST00000118804 996 ntBASIC12.22□□□□□ -0.45
Sox1P53783 Gm11660-201ENSMUST00000120955 412 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms