Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.83□□□□□ -0.52
Pdx1P52946 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pdx1P52946 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.83□□□□□ -0.52
Pdx1P52946 Gm27627-201ENSMUST00000183644 150 ntBASIC11.83□□□□□ -0.52
Pdx1P52946 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.83□□□□□ -0.52
Pdx1P52946 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pdx1P52946 Gm8956-201ENSMUST00000203939 825 ntBASIC11.83□□□□□ -0.52
Pdx1P52946 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pdx1P52946 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.83□□□□□ -0.52
Pdx1P52946 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.83□□□□□ -0.52
Pdx1P52946 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pdx1P52946 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Pdx1P52946 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Pdx1P52946 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pdx1P52946 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pdx1P52946 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.83□□□□□ -0.52
Pdx1P52946 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pdx1P52946 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.83□□□□□ -0.52
Pdx1P52946 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pdx1P52946 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pdx1P52946 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.83□□□□□ -0.52
Pdx1P52946 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.83□□□□□ -0.52
Pdx1P52946 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pdx1P52946 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pdx1P52946 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Pdx1P52946 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.83□□□□□ -0.52
Pdx1P52946 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pdx1P52946 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Pdx1P52946 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pdx1P52946 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdx1P52946 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdx1P52946 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.82□□□□□ -0.52
Pdx1P52946 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pdx1P52946 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.82□□□□□ -0.52
Pdx1P52946 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdx1P52946 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdx1P52946 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdx1P52946 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdx1P52946 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.82□□□□□ -0.52
Pdx1P52946 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pdx1P52946 Gm26286-201ENSMUST00000104166 134 ntBASIC11.82□□□□□ -0.52
Pdx1P52946 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pdx1P52946 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdx1P52946 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.82□□□□□ -0.52
Pdx1P52946 Gm2383-201ENSMUST00000181461 807 ntBASIC11.82□□□□□ -0.52
Pdx1P52946 Gm35960-201ENSMUST00000202712 767 ntBASIC11.82□□□□□ -0.52
Pdx1P52946 Gm17827-201ENSMUST00000211825 742 ntBASIC11.82□□□□□ -0.52
Pdx1P52946 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.82□□□□□ -0.52
Pdx1P52946 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.82□□□□□ -0.52
Pdx1P52946 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdx1P52946 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Pdx1P52946 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Pdx1P52946 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdx1P52946 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdx1P52946 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdx1P52946 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdx1P52946 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdx1P52946 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdx1P52946 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.82□□□□□ -0.52
Pdx1P52946 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdx1P52946 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.82□□□□□ -0.52
Pdx1P52946 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdx1P52946 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdx1P52946 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pdx1P52946 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pdx1P52946 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pdx1P52946 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pdx1P52946 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pdx1P52946 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pdx1P52946 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pdx1P52946 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pdx1P52946 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pdx1P52946 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pdx1P52946 Gm12380-201ENSMUST00000119012 544 ntBASIC11.81□□□□□ -0.52
Pdx1P52946 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.81□□□□□ -0.52
Pdx1P52946 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pdx1P52946 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pdx1P52946 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pdx1P52946 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.81□□□□□ -0.52
Pdx1P52946 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pdx1P52946 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pdx1P52946 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pdx1P52946 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pdx1P52946 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pdx1P52946 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pdx1P52946 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.81□□□□□ -0.52
Pdx1P52946 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pdx1P52946 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pdx1P52946 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pdx1P52946 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.81□□□□□ -0.52
Pdx1P52946 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pdx1P52946 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pdx1P52946 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.81□□□□□ -0.52
Pdx1P52946 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pdx1P52946 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pdx1P52946 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.81□□□□□ -0.52
Pdx1P52946 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pdx1P52946 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pdx1P52946 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.81□□□□□ -0.52
Pdx1P52946 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms