Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.83□□□□□ -0.68
Rfx3P48381 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.83□□□□□ -0.68
Rfx3P48381 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rfx3P48381 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.83□□□□□ -0.68
Rfx3P48381 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.83□□□□□ -0.68
Rfx3P48381 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Rfx3P48381 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.82□□□□□ -0.68
Rfx3P48381 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Rfx3P48381 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Rfx3P48381 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Rfx3P48381 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Rfx3P48381 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Rfx3P48381 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.82□□□□□ -0.68
Rfx3P48381 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.82□□□□□ -0.68
Rfx3P48381 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC10.82□□□□□ -0.68
Rfx3P48381 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.82□□□□□ -0.68
Rfx3P48381 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.82□□□□□ -0.68
Rfx3P48381 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.82□□□□□ -0.68
Rfx3P48381 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC10.82□□□□□ -0.68
Rfx3P48381 Gm2546-201ENSMUST00000182630 991 ntBASIC10.82□□□□□ -0.68
Rfx3P48381 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.82□□□□□ -0.68
Rfx3P48381 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.82□□□□□ -0.68
Rfx3P48381 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.82□□□□□ -0.68
Rfx3P48381 Gm38002-201ENSMUST00000193255 180 ntBASIC10.82□□□□□ -0.68
Rfx3P48381 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.82□□□□□ -0.68
Rfx3P48381 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.82□□□□□ -0.68
Rfx3P48381 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.82□□□□□ -0.68
Rfx3P48381 Gm19309-201ENSMUST00000218295 205 ntBASIC10.82□□□□□ -0.68
Rfx3P48381 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.82□□□□□ -0.68
Rfx3P48381 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Rfx3P48381 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.82□□□□□ -0.68
Rfx3P48381 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.82□□□□□ -0.68
Rfx3P48381 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Rfx3P48381 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Rfx3P48381 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Rfx3P48381 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Rfx3P48381 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.82□□□□□ -0.68
Rfx3P48381 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rfx3P48381 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rfx3P48381 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rfx3P48381 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rfx3P48381 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rfx3P48381 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.81□□□□□ -0.68
Rfx3P48381 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Rfx3P48381 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.81□□□□□ -0.68
Rfx3P48381 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rfx3P48381 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rfx3P48381 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Rfx3P48381 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rfx3P48381 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rfx3P48381 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rfx3P48381 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rfx3P48381 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rfx3P48381 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.81□□□□□ -0.68
Rfx3P48381 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rfx3P48381 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rfx3P48381 Gm24830-201ENSMUST00000102024 166 ntBASIC10.81□□□□□ -0.68
Rfx3P48381 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rfx3P48381 Gm13875-201ENSMUST00000120162 282 ntBASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 1504 ms