Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nedd4P46935 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nedd4P46935 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nedd4P46935 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nedd4P46935 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nedd4P46935 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nedd4P46935 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Nedd4P46935 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nedd4P46935 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nedd4P46935 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Nedd4P46935 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC14.36□□□□□ -0.11
Nedd4P46935 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC14.36□□□□□ -0.11
Nedd4P46935 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nedd4P46935 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nedd4P46935 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nedd4P46935 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nedd4P46935 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nedd4P46935 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nedd4P46935 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nedd4P46935 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
Nedd4P46935 Gm18294-201ENSMUST00000176980 1748 ntBASIC14.36□□□□□ -0.11
Nedd4P46935 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nedd4P46935 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC14.36□□□□□ -0.11
Nedd4P46935 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nedd4P46935 Gm6322-201ENSMUST00000118789 1004 ntBASIC14.36□□□□□ -0.11
Nedd4P46935 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nedd4P46935 Gm11244-201ENSMUST00000121243 237 ntBASIC14.36□□□□□ -0.11
Nedd4P46935 Gm15620-201ENSMUST00000122949 270 ntBASIC14.36□□□□□ -0.11
Nedd4P46935 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC14.36□□□□□ -0.11
Nedd4P46935 Gm8459-201ENSMUST00000162504 760 ntBASIC14.36□□□□□ -0.11
Nedd4P46935 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Nedd4P46935 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC14.36□□□□□ -0.11
Nedd4P46935 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nedd4P46935 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nedd4P46935 Gm9034-201ENSMUST00000182071 1005 ntBASIC14.36□□□□□ -0.11
Nedd4P46935 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nedd4P46935 Gm43854-201ENSMUST00000200418 394 ntBASIC14.36□□□□□ -0.11
Nedd4P46935 Gm39288-201ENSMUST00000210554 446 ntBASIC14.36□□□□□ -0.11
Nedd4P46935 CT009546.1-201ENSMUST00000222573 1120 ntBASIC14.36□□□□□ -0.11
Nedd4P46935 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nedd4P46935 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nedd4P46935 Gm10263-201ENSMUST00000085163 300 ntBASIC14.36□□□□□ -0.11
Nedd4P46935 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nedd4P46935 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Nedd4P46935 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.36□□□□□ -0.11
Nedd4P46935 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Nedd4P46935 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nedd4P46935 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Nedd4P46935 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nedd4P46935 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nedd4P46935 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Nedd4P46935 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd4P46935 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd4P46935 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd4P46935 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd4P46935 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd4P46935 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd4P46935 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd4P46935 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd4P46935 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Nedd4P46935 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd4P46935 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd4P46935 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Nedd4P46935 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd4P46935 Gm12791-201ENSMUST00000120788 655 ntBASIC14.35□□□□□ -0.11
Nedd4P46935 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd4P46935 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Nedd4P46935 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd4P46935 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Nedd4P46935 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd4P46935 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd4P46935 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.35□□□□□ -0.11
Nedd4P46935 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd4P46935 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd4P46935 Gm26035-201ENSMUST00000083065 308 ntBASIC14.35□□□□□ -0.11
Nedd4P46935 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.35□□□□□ -0.11
Nedd4P46935 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd4P46935 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd4P46935 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Nedd4P46935 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd4P46935 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd4P46935 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd4P46935 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd4P46935 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd4P46935 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nedd4P46935 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd4P46935 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd4P46935 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.34□□□□□ -0.11
Nedd4P46935 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd4P46935 Gm21759-201ENSMUST00000178345 1828 ntBASIC14.34□□□□□ -0.11
Nedd4P46935 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC14.34□□□□□ -0.11
Nedd4P46935 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.34□□□□□ -0.11
Nedd4P46935 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd4P46935 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.34□□□□□ -0.11
Nedd4P46935 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd4P46935 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd4P46935 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nedd4P46935 Gm11957-201ENSMUST00000118304 779 ntBASIC14.34□□□□□ -0.11
Nedd4P46935 Gm12179-201ENSMUST00000118344 1272 ntBASIC14.34□□□□□ -0.11
Nedd4P46935 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms