Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.37□□□□□ -0.59
Cdx2P43241 CT009536.2-201ENSMUST00000225370 665 ntBASIC11.37□□□□□ -0.59
Cdx2P43241 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.37□□□□□ -0.59
Cdx2P43241 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdx2P43241 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdx2P43241 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdx2P43241 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Cdx2P43241 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.37□□□□□ -0.59
Cdx2P43241 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdx2P43241 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cdx2P43241 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdx2P43241 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Cdx2P43241 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.37□□□□□ -0.59
Cdx2P43241 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdx2P43241 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdx2P43241 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cdx2P43241 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdx2P43241 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cdx2P43241 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Cdx2P43241 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdx2P43241 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cdx2P43241 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdx2P43241 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdx2P43241 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cdx2P43241 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Cdx2P43241 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cdx2P43241 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdx2P43241 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdx2P43241 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdx2P43241 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdx2P43241 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdx2P43241 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdx2P43241 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdx2P43241 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Cdx2P43241 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdx2P43241 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.36□□□□□ -0.59
Cdx2P43241 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdx2P43241 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.36□□□□□ -0.59
Cdx2P43241 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdx2P43241 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cdx2P43241 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.36□□□□□ -0.59
Cdx2P43241 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Cdx2P43241 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdx2P43241 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdx2P43241 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
Cdx2P43241 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdx2P43241 Gm25063-201ENSMUST00000104666 94 ntBASIC11.36□□□□□ -0.59
Cdx2P43241 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.36□□□□□ -0.59
Cdx2P43241 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC11.36□□□□□ -0.59
Cdx2P43241 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdx2P43241 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC11.36□□□□□ -0.59
Cdx2P43241 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.36□□□□□ -0.59
Cdx2P43241 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.36□□□□□ -0.59
Cdx2P43241 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdx2P43241 Gm29410-201ENSMUST00000188383 694 ntBASIC11.36□□□□□ -0.59
Cdx2P43241 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdx2P43241 Gm6450-201ENSMUST00000200896 574 ntBASIC11.36□□□□□ -0.59
Cdx2P43241 Gm8342-201ENSMUST00000209839 757 ntBASIC11.36□□□□□ -0.59
Cdx2P43241 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdx2P43241 Gm9139-201ENSMUST00000218817 700 ntBASIC11.36□□□□□ -0.59
Cdx2P43241 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdx2P43241 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.36□□□□□ -0.59
Cdx2P43241 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Cdx2P43241 AC136376.2-201ENSMUST00000228819 490 ntBASIC11.36□□□□□ -0.59
Cdx2P43241 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdx2P43241 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Cdx2P43241 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Cdx2P43241 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdx2P43241 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdx2P43241 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdx2P43241 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdx2P43241 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdx2P43241 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Cdx2P43241 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdx2P43241 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdx2P43241 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdx2P43241 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdx2P43241 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdx2P43241 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdx2P43241 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdx2P43241 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdx2P43241 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.36□□□□□ -0.59
Cdx2P43241 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdx2P43241 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdx2P43241 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdx2P43241 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Cdx2P43241 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdx2P43241 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdx2P43241 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Cdx2P43241 Gm7278-201ENSMUST00000119836 1401 ntBASIC11.35□□□□□ -0.59
Cdx2P43241 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cdx2P43241 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdx2P43241 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.35□□□□□ -0.59
Cdx2P43241 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdx2P43241 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdx2P43241 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdx2P43241 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdx2P43241 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Cdx2P43241 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC11.35□□□□□ -0.59
Cdx2P43241 Gm13600-201ENSMUST00000117949 744 ntBASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms