Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
TfamP40630 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
TfamP40630 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
TfamP40630 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
TfamP40630 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TfamP40630 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TfamP40630 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TfamP40630 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TfamP40630 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
TfamP40630 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TfamP40630 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TfamP40630 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TfamP40630 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
TfamP40630 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TfamP40630 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TfamP40630 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TfamP40630 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TfamP40630 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TfamP40630 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TfamP40630 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
TfamP40630 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TfamP40630 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TfamP40630 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TfamP40630 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TfamP40630 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.59□□□□□ -0.55
TfamP40630 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TfamP40630 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
TfamP40630 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.59□□□□□ -0.55
TfamP40630 Gm14247-201ENSMUST00000120950 237 ntBASIC11.59□□□□□ -0.55
TfamP40630 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.59□□□□□ -0.55
TfamP40630 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.59□□□□□ -0.55
TfamP40630 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
TfamP40630 Gm43118-201ENSMUST00000199149 775 ntBASIC11.59□□□□□ -0.55
TfamP40630 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.59□□□□□ -0.55
TfamP40630 Morn2-202ENSMUST00000227729 656 ntBASIC11.59□□□□□ -0.55
TfamP40630 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.59□□□□□ -0.55
TfamP40630 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
TfamP40630 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TfamP40630 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TfamP40630 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TfamP40630 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.59□□□□□ -0.55
TfamP40630 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
TfamP40630 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
TfamP40630 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TfamP40630 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TfamP40630 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TfamP40630 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
TfamP40630 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TfamP40630 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.59□□□□□ -0.55
TfamP40630 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TfamP40630 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
TfamP40630 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
TfamP40630 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.58□□□□□ -0.55
TfamP40630 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
TfamP40630 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
TfamP40630 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.58□□□□□ -0.56
TfamP40630 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
TfamP40630 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TfamP40630 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
TfamP40630 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TfamP40630 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TfamP40630 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
TfamP40630 Gm25214-201ENSMUST00000104573 129 ntBASIC11.58□□□□□ -0.56
TfamP40630 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
TfamP40630 Gm11793-201ENSMUST00000120433 981 ntBASIC11.58□□□□□ -0.56
TfamP40630 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.58□□□□□ -0.56
TfamP40630 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.58□□□□□ -0.56
TfamP40630 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.58□□□□□ -0.56
TfamP40630 Gm42627-201ENSMUST00000197347 224 ntBASIC11.58□□□□□ -0.56
TfamP40630 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TfamP40630 Gm10608-202ENSMUST00000213924 676 ntBASIC11.58□□□□□ -0.56
TfamP40630 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
TfamP40630 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
TfamP40630 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.58□□□□□ -0.56
TfamP40630 Gm7046-201ENSMUST00000221351 977 ntBASIC11.58□□□□□ -0.56
TfamP40630 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.58□□□□□ -0.56
TfamP40630 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TfamP40630 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TfamP40630 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
TfamP40630 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
TfamP40630 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TfamP40630 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
TfamP40630 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TfamP40630 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.58□□□□□ -0.56
TfamP40630 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
TfamP40630 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
TfamP40630 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
TfamP40630 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
TfamP40630 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TfamP40630 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
TfamP40630 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.58□□□□□ -0.56
TfamP40630 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
TfamP40630 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
TfamP40630 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
TfamP40630 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TfamP40630 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
TfamP40630 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TfamP40630 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TfamP40630 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TfamP40630 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms