Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VhlP40338 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VhlP40338 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
VhlP40338 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC9.82□□□□□ -0.84
VhlP40338 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
VhlP40338 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
VhlP40338 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
VhlP40338 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC9.82□□□□□ -0.84
VhlP40338 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC9.82□□□□□ -0.84
VhlP40338 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
VhlP40338 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC9.82□□□□□ -0.84
VhlP40338 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
VhlP40338 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
VhlP40338 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
VhlP40338 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
VhlP40338 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
VhlP40338 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
VhlP40338 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC9.82□□□□□ -0.84
VhlP40338 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC9.82□□□□□ -0.84
VhlP40338 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
VhlP40338 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VhlP40338 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VhlP40338 Gm10268-201ENSMUST00000085340 555 ntBASIC9.82□□□□□ -0.84
VhlP40338 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VhlP40338 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VhlP40338 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
VhlP40338 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
VhlP40338 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VhlP40338 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
VhlP40338 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VhlP40338 Gm38273-201ENSMUST00000194987 2382 ntBASIC9.82□□□□□ -0.84
VhlP40338 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC9.82□□□□□ -0.84
VhlP40338 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC9.82□□□□□ -0.84
VhlP40338 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VhlP40338 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
VhlP40338 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VhlP40338 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
VhlP40338 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VhlP40338 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
VhlP40338 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
VhlP40338 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VhlP40338 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC9.82□□□□□ -0.84
VhlP40338 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VhlP40338 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
VhlP40338 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
VhlP40338 Gm8793-201ENSMUST00000183069 1303 ntBASIC9.82□□□□□ -0.84
VhlP40338 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
VhlP40338 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
VhlP40338 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
VhlP40338 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
VhlP40338 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC9.81□□□□□ -0.84
VhlP40338 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VhlP40338 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
VhlP40338 Gm43242-201ENSMUST00000199507 1776 ntBASIC9.81□□□□□ -0.84
VhlP40338 Gm45496-201ENSMUST00000209918 2917 ntBASIC9.81□□□□□ -0.84
VhlP40338 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VhlP40338 Gm44152-201ENSMUST00000205007 1691 ntBASIC9.81□□□□□ -0.84
VhlP40338 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
VhlP40338 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
VhlP40338 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VhlP40338 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
VhlP40338 Gm13142-201ENSMUST00000117213 1453 ntBASIC9.81□□□□□ -0.84
VhlP40338 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC9.81□□□□□ -0.84
VhlP40338 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
VhlP40338 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC9.81□□□□□ -0.84
VhlP40338 Gm15610-201ENSMUST00000120584 195 ntBASIC9.81□□□□□ -0.84
VhlP40338 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC9.81□□□□□ -0.84
VhlP40338 Gm14247-201ENSMUST00000120950 237 ntBASIC9.81□□□□□ -0.84
VhlP40338 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
VhlP40338 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
VhlP40338 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
VhlP40338 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
VhlP40338 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VhlP40338 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC9.81□□□□□ -0.84
VhlP40338 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
VhlP40338 Gm27839-201ENSMUST00000184242 106 ntBASIC9.81□□□□□ -0.84
VhlP40338 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC9.81□□□□□ -0.84
VhlP40338 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
VhlP40338 Gm42442-201ENSMUST00000197951 1133 ntBASIC9.81□□□□□ -0.84
VhlP40338 Gm43438-201ENSMUST00000198133 379 ntBASIC9.81□□□□□ -0.84
VhlP40338 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC9.81□□□□□ -0.84
VhlP40338 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC9.81□□□□□ -0.84
VhlP40338 Tyms-ps-201ENSMUST00000219550 915 ntBASIC9.81□□□□□ -0.84
VhlP40338 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
VhlP40338 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC9.81□□□□□ -0.84
VhlP40338 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VhlP40338 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VhlP40338 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VhlP40338 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VhlP40338 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
VhlP40338 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
VhlP40338 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
VhlP40338 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VhlP40338 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VhlP40338 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
VhlP40338 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC9.81□□□□□ -0.84
VhlP40338 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
VhlP40338 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
VhlP40338 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VhlP40338 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms