Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl12P40224 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
Cxcl12P40224 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl12P40224 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl12P40224 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl12P40224 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl12P40224 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl12P40224 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl12P40224 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.28□□□□□ -0.44
Cxcl12P40224 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl12P40224 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl12P40224 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl12P40224 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl12P40224 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.28□□□□□ -0.44
Cxcl12P40224 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.28□□□□□ -0.44
Cxcl12P40224 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl12P40224 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl12P40224 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Cxcl12P40224 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl12P40224 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl12P40224 Gm11996-201ENSMUST00000117538 915 ntBASIC12.28□□□□□ -0.44
Cxcl12P40224 Gm13445-201ENSMUST00000121664 307 ntBASIC12.28□□□□□ -0.44
Cxcl12P40224 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl12P40224 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl12P40224 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.28□□□□□ -0.44
Cxcl12P40224 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl12P40224 Gm6855-201ENSMUST00000206307 790 ntBASIC12.28□□□□□ -0.44
Cxcl12P40224 Gm45592-201ENSMUST00000209605 1043 ntBASIC12.28□□□□□ -0.44
Cxcl12P40224 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.28□□□□□ -0.44
Cxcl12P40224 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl12P40224 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.28□□□□□ -0.44
Cxcl12P40224 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Cxcl12P40224 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Cxcl12P40224 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl12P40224 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl12P40224 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl12P40224 Gm18294-201ENSMUST00000176980 1748 ntBASIC12.28□□□□□ -0.44
Cxcl12P40224 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Cxcl12P40224 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl12P40224 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl12P40224 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl12P40224 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl12P40224 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl12P40224 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cxcl12P40224 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cxcl12P40224 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cxcl12P40224 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cxcl12P40224 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Cxcl12P40224 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cxcl12P40224 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cxcl12P40224 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cxcl12P40224 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cxcl12P40224 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Cxcl12P40224 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cxcl12P40224 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.27□□□□□ -0.45
Cxcl12P40224 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cxcl12P40224 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cxcl12P40224 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.27□□□□□ -0.45
Cxcl12P40224 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cxcl12P40224 Gm15620-201ENSMUST00000122949 270 ntBASIC12.27□□□□□ -0.45
Cxcl12P40224 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.27□□□□□ -0.45
Cxcl12P40224 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC12.27□□□□□ -0.45
Cxcl12P40224 Gm9081-201ENSMUST00000182346 991 ntBASIC12.27□□□□□ -0.45
Cxcl12P40224 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Cxcl12P40224 Gm42433-201ENSMUST00000196806 940 ntBASIC12.27□□□□□ -0.45
Cxcl12P40224 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Cxcl12P40224 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.27□□□□□ -0.45
Cxcl12P40224 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.27□□□□□ -0.45
Cxcl12P40224 AC158388.3-202ENSMUST00000225517 775 ntBASIC12.27□□□□□ -0.45
Cxcl12P40224 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cxcl12P40224 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cxcl12P40224 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cxcl12P40224 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.27□□□□□ -0.45
Cxcl12P40224 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cxcl12P40224 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cxcl12P40224 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cxcl12P40224 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cxcl12P40224 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.27□□□□□ -0.45
Cxcl12P40224 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cxcl12P40224 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cxcl12P40224 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cxcl12P40224 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cxcl12P40224 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC12.27□□□□□ -0.45
Cxcl12P40224 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.27□□□□□ -0.45
Cxcl12P40224 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Cxcl12P40224 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cxcl12P40224 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cxcl12P40224 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cxcl12P40224 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cxcl12P40224 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.27□□□□□ -0.45
Cxcl12P40224 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Cxcl12P40224 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cxcl12P40224 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Cxcl12P40224 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cxcl12P40224 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cxcl12P40224 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl12P40224 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cxcl12P40224 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl12P40224 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl12P40224 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms