Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc5P32043 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.11□□□□□ -0.63
Hoxc5P32043 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc5P32043 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc5P32043 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc5P32043 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Hoxc5P32043 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc5P32043 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Hoxc5P32043 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.11□□□□□ -0.63
Hoxc5P32043 Rprl1-201ENSMUST00000158050 327 ntBASIC11.11□□□□□ -0.63
Hoxc5P32043 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc5P32043 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.11□□□□□ -0.63
Hoxc5P32043 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc5P32043 Gm42627-201ENSMUST00000197347 224 ntBASIC11.11□□□□□ -0.63
Hoxc5P32043 Gm35960-201ENSMUST00000202712 767 ntBASIC11.11□□□□□ -0.63
Hoxc5P32043 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.11□□□□□ -0.63
Hoxc5P32043 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.11□□□□□ -0.63
Hoxc5P32043 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.11□□□□□ -0.63
Hoxc5P32043 Morn2-202ENSMUST00000227729 656 ntBASIC11.11□□□□□ -0.63
Hoxc5P32043 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc5P32043 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc5P32043 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc5P32043 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Hoxc5P32043 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc5P32043 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc5P32043 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc5P32043 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc5P32043 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc5P32043 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc5P32043 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.11□□□□□ -0.63
Hoxc5P32043 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc5P32043 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Hoxc5P32043 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Hoxc5P32043 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Hoxc5P32043 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc5P32043 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc5P32043 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc5P32043 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc5P32043 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.1□□□□□ -0.63
Hoxc5P32043 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc5P32043 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc5P32043 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc5P32043 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc5P32043 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc5P32043 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc5P32043 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc5P32043 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.1□□□□□ -0.63
Hoxc5P32043 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc5P32043 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc5P32043 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Hoxc5P32043 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Hoxc5P32043 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Hoxc5P32043 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc5P32043 Gm23912-201ENSMUST00000104687 87 ntBASIC11.1□□□□□ -0.63
Hoxc5P32043 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.1□□□□□ -0.63
Hoxc5P32043 Gm13786-201ENSMUST00000122371 333 ntBASIC11.1□□□□□ -0.63
Hoxc5P32043 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc5P32043 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc5P32043 Gm37489-201ENSMUST00000191883 159 ntBASIC11.1□□□□□ -0.63
Hoxc5P32043 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc5P32043 Olfr284-202ENSMUST00000206647 966 ntBASIC11.1□□□□□ -0.63
Hoxc5P32043 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc5P32043 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc5P32043 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc5P32043 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc5P32043 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc5P32043 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc5P32043 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Hoxc5P32043 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Hoxc5P32043 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.1□□□□□ -0.63
Hoxc5P32043 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.1□□□□□ -0.63
Hoxc5P32043 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Hoxc5P32043 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Hoxc5P32043 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc5P32043 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc5P32043 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc5P32043 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Hoxc5P32043 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.09□□□□□ -0.63
Hoxc5P32043 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc5P32043 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc5P32043 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc5P32043 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc5P32043 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc5P32043 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc5P32043 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.09□□□□□ -0.63
Hoxc5P32043 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc5P32043 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Hoxc5P32043 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc5P32043 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc5P32043 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc5P32043 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.09□□□□□ -0.63
Hoxc5P32043 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.09□□□□□ -0.63
Hoxc5P32043 Gm14127-201ENSMUST00000117906 678 ntBASIC11.09□□□□□ -0.63
Hoxc5P32043 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.09□□□□□ -0.63
Hoxc5P32043 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc5P32043 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Hoxc5P32043 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Hoxc5P32043 Gm29396-201ENSMUST00000185659 716 ntBASIC11.09□□□□□ -0.63
Hoxc5P32043 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxc5P32043 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms