Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Slc6a1P31648 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Slc6a1P31648 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Slc6a1P31648 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Slc6a1P31648 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Slc6a1P31648 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Slc6a1P31648 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.32□□□□□ -0.76
Slc6a1P31648 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Slc6a1P31648 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Slc6a1P31648 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Slc6a1P31648 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC10.31□□□□□ -0.76
Slc6a1P31648 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.31□□□□□ -0.76
Slc6a1P31648 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Slc6a1P31648 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Slc6a1P31648 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Slc6a1P31648 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Slc6a1P31648 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Slc6a1P31648 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Slc6a1P31648 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Slc6a1P31648 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.31□□□□□ -0.76
Slc6a1P31648 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
Slc6a1P31648 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Slc6a1P31648 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Slc6a1P31648 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Slc6a1P31648 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC10.31□□□□□ -0.76
Slc6a1P31648 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Slc6a1P31648 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC10.31□□□□□ -0.76
Slc6a1P31648 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10.31□□□□□ -0.76
Slc6a1P31648 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.31□□□□□ -0.76
Slc6a1P31648 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Slc6a1P31648 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC10.31□□□□□ -0.76
Slc6a1P31648 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Slc6a1P31648 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Slc6a1P31648 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Slc6a1P31648 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Slc6a1P31648 Gm24136-201ENSMUST00000083374 165 ntBASIC10.31□□□□□ -0.76
Slc6a1P31648 Gm6091-201ENSMUST00000098307 165 ntBASIC10.31□□□□□ -0.76
Slc6a1P31648 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Slc6a1P31648 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Slc6a1P31648 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.31□□□□□ -0.76
Slc6a1P31648 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.31□□□□□ -0.76
Slc6a1P31648 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Slc6a1P31648 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.31□□□□□ -0.76
Slc6a1P31648 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Slc6a1P31648 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Slc6a1P31648 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
Slc6a1P31648 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Slc6a1P31648 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Slc6a1P31648 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.31□□□□□ -0.76
Slc6a1P31648 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.31□□□□□ -0.76
Slc6a1P31648 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.31□□□□□ -0.76
Slc6a1P31648 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Slc6a1P31648 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Slc6a1P31648 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Slc6a1P31648 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a1P31648 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a1P31648 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.3□□□□□ -0.76
Slc6a1P31648 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a1P31648 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a1P31648 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Slc6a1P31648 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a1P31648 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a1P31648 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Slc6a1P31648 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a1P31648 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
Slc6a1P31648 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a1P31648 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a1P31648 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.3□□□□□ -0.76
Slc6a1P31648 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a1P31648 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.3□□□□□ -0.76
Slc6a1P31648 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a1P31648 Gm16202-201ENSMUST00000117532 544 ntBASIC10.3□□□□□ -0.76
Slc6a1P31648 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a1P31648 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC10.3□□□□□ -0.76
Slc6a1P31648 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a1P31648 Gm9299-201ENSMUST00000206392 1140 ntBASIC10.3□□□□□ -0.76
Slc6a1P31648 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a1P31648 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a1P31648 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a1P31648 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.3□□□□□ -0.76
Slc6a1P31648 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a1P31648 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a1P31648 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a1P31648 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a1P31648 Gm7553-201ENSMUST00000185805 1426 ntBASIC10.3□□□□□ -0.76
Slc6a1P31648 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a1P31648 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Slc6a1P31648 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a1P31648 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a1P31648 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a1P31648 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.3□□□□□ -0.76
Slc6a1P31648 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a1P31648 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a1P31648 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a1P31648 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.3□□□□□ -0.76
Slc6a1P31648 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a1P31648 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a1P31648 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a1P31648 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a1P31648 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms