Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp3P28862 Gm23045-201ENSMUST00000175041 96 ntBASIC12.79□□□□□ -0.36
Mmp3P28862 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp3P28862 Gm38151-201ENSMUST00000195085 289 ntBASIC12.79□□□□□ -0.36
Mmp3P28862 Gm43186-201ENSMUST00000198130 824 ntBASIC12.79□□□□□ -0.36
Mmp3P28862 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp3P28862 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.79□□□□□ -0.36
Mmp3P28862 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp3P28862 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp3P28862 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp3P28862 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp3P28862 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Mmp3P28862 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp3P28862 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp3P28862 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp3P28862 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.79□□□□□ -0.36
Mmp3P28862 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp3P28862 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Mmp3P28862 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp3P28862 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp3P28862 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp3P28862 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp3P28862 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp3P28862 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp3P28862 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.78□□□□□ -0.36
Mmp3P28862 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp3P28862 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp3P28862 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp3P28862 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp3P28862 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp3P28862 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp3P28862 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp3P28862 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp3P28862 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp3P28862 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp3P28862 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp3P28862 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp3P28862 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp3P28862 Gm22711-201ENSMUST00000116890 133 ntBASIC12.78□□□□□ -0.36
Mmp3P28862 Gm11783-201ENSMUST00000119549 885 ntBASIC12.78□□□□□ -0.36
Mmp3P28862 Gm11246-201ENSMUST00000120880 345 ntBASIC12.78□□□□□ -0.36
Mmp3P28862 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.78□□□□□ -0.36
Mmp3P28862 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.78□□□□□ -0.36
Mmp3P28862 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.78□□□□□ -0.36
Mmp3P28862 Gm12407-201ENSMUST00000180219 324 ntBASIC12.78□□□□□ -0.36
Mmp3P28862 Gm27438-201ENSMUST00000183480 110 ntBASIC12.78□□□□□ -0.36
Mmp3P28862 Gm28937-201ENSMUST00000185413 695 ntBASIC12.78□□□□□ -0.36
Mmp3P28862 Gm29400-201ENSMUST00000187208 695 ntBASIC12.78□□□□□ -0.36
Mmp3P28862 Gm28662-201ENSMUST00000188446 695 ntBASIC12.78□□□□□ -0.36
Mmp3P28862 Gm28251-201ENSMUST00000188835 695 ntBASIC12.78□□□□□ -0.36
Mmp3P28862 Gm9136-201ENSMUST00000193368 454 ntBASIC12.78□□□□□ -0.36
Mmp3P28862 Gm37318-201ENSMUST00000194325 695 ntBASIC12.78□□□□□ -0.36
Mmp3P28862 Gm38017-201ENSMUST00000194768 695 ntBASIC12.78□□□□□ -0.36
Mmp3P28862 Gm37287-201ENSMUST00000195449 695 ntBASIC12.78□□□□□ -0.36
Mmp3P28862 Gm37793-201ENSMUST00000195548 695 ntBASIC12.78□□□□□ -0.36
Mmp3P28862 Gm8365-201ENSMUST00000197334 648 ntBASIC12.78□□□□□ -0.36
Mmp3P28862 Gm7940-201ENSMUST00000218195 769 ntBASIC12.78□□□□□ -0.36
Mmp3P28862 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Mmp3P28862 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp3P28862 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp3P28862 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp3P28862 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp3P28862 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.78□□□□□ -0.36
Mmp3P28862 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp3P28862 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Mmp3P28862 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Mmp3P28862 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Mmp3P28862 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp3P28862 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp3P28862 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp3P28862 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp3P28862 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Mmp3P28862 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Mmp3P28862 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Mmp3P28862 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Mmp3P28862 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Mmp3P28862 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Mmp3P28862 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Mmp3P28862 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Mmp3P28862 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Mmp3P28862 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Mmp3P28862 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
Mmp3P28862 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Mmp3P28862 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Mmp3P28862 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Mmp3P28862 Gm11836-201ENSMUST00000121022 441 ntBASIC12.77□□□□□ -0.37
Mmp3P28862 Gm8737-201ENSMUST00000122208 642 ntBASIC12.77□□□□□ -0.37
Mmp3P28862 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.77□□□□□ -0.37
Mmp3P28862 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Mmp3P28862 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC12.77□□□□□ -0.37
Mmp3P28862 Gm3150-201ENSMUST00000166418 204 ntBASIC12.77□□□□□ -0.37
Mmp3P28862 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.77□□□□□ -0.37
Mmp3P28862 Gm18367-201ENSMUST00000176139 600 ntBASIC12.77□□□□□ -0.37
Mmp3P28862 Gm4654-201ENSMUST00000183305 982 ntBASIC12.77□□□□□ -0.37
Mmp3P28862 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.77□□□□□ -0.37
Mmp3P28862 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.77□□□□□ -0.37
Mmp3P28862 Gm2517-201ENSMUST00000215651 348 ntBASIC12.77□□□□□ -0.37
Mmp3P28862 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.77□□□□□ -0.37
Mmp3P28862 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.77□□□□□ -0.37
Mmp3P28862 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms