Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
RxrbP28704 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
RxrbP28704 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RxrbP28704 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
RxrbP28704 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RxrbP28704 Gm10652-201ENSMUST00000199790 2622 ntBASIC12.02□□□□□ -0.49
RxrbP28704 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.02□□□□□ -0.49
RxrbP28704 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RxrbP28704 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.02□□□□□ -0.49
RxrbP28704 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RxrbP28704 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
RxrbP28704 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
RxrbP28704 Gm14247-201ENSMUST00000120950 237 ntBASIC12.02□□□□□ -0.49
RxrbP28704 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
RxrbP28704 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RxrbP28704 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RxrbP28704 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RxrbP28704 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
RxrbP28704 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
RxrbP28704 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC12.02□□□□□ -0.49
RxrbP28704 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.02□□□□□ -0.49
RxrbP28704 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RxrbP28704 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.02□□□□□ -0.49
RxrbP28704 Gm5904-201ENSMUST00000210286 865 ntBASIC12.02□□□□□ -0.49
RxrbP28704 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.02□□□□□ -0.49
RxrbP28704 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RxrbP28704 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RxrbP28704 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RxrbP28704 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RxrbP28704 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
RxrbP28704 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RxrbP28704 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
RxrbP28704 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RxrbP28704 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RxrbP28704 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RxrbP28704 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.02□□□□□ -0.49
RxrbP28704 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RxrbP28704 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC12.02□□□□□ -0.49
RxrbP28704 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RxrbP28704 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RxrbP28704 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RxrbP28704 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RxrbP28704 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RxrbP28704 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RxrbP28704 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
RxrbP28704 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
RxrbP28704 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.01□□□□□ -0.49
RxrbP28704 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RxrbP28704 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.01□□□□□ -0.49
RxrbP28704 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RxrbP28704 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RxrbP28704 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RxrbP28704 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RxrbP28704 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RxrbP28704 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RxrbP28704 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
RxrbP28704 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
RxrbP28704 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RxrbP28704 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RxrbP28704 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RxrbP28704 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RxrbP28704 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RxrbP28704 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RxrbP28704 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RxrbP28704 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RxrbP28704 Gm5706-201ENSMUST00000181525 993 ntBASIC12.01□□□□□ -0.49
RxrbP28704 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RxrbP28704 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RxrbP28704 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RxrbP28704 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
RxrbP28704 Gm17244-201ENSMUST00000192482 3416 ntBASIC12.01□□□□□ -0.49
RxrbP28704 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RxrbP28704 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.01□□□□□ -0.49
RxrbP28704 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.01□□□□□ -0.49
RxrbP28704 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RxrbP28704 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RxrbP28704 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
RxrbP28704 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RxrbP28704 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RxrbP28704 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
RxrbP28704 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.01□□□□□ -0.49
RxrbP28704 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RxrbP28704 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RxrbP28704 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RxrbP28704 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RxrbP28704 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RxrbP28704 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
RxrbP28704 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.01□□□□□ -0.49
RxrbP28704 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RxrbP28704 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RxrbP28704 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RxrbP28704 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RxrbP28704 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
RxrbP28704 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12□□□□□ -0.49
RxrbP28704 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RxrbP28704 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RxrbP28704 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
RxrbP28704 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
RxrbP28704 Gm18806-201ENSMUST00000207607 1775 ntBASIC12□□□□□ -0.49
RxrbP28704 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms