Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ccl6P27784 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ccl6P27784 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Ccl6P27784 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Ccl6P27784 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ccl6P27784 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ccl6P27784 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ccl6P27784 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ccl6P27784 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Ccl6P27784 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Ccl6P27784 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ccl6P27784 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ccl6P27784 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Ccl6P27784 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ccl6P27784 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Ccl6P27784 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC9.33□□□□□ -0.92
Ccl6P27784 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Ccl6P27784 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC9.33□□□□□ -0.92
Ccl6P27784 Gm15547-201ENSMUST00000122152 333 ntBASIC9.33□□□□□ -0.92
Ccl6P27784 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ccl6P27784 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Ccl6P27784 Rprl1-201ENSMUST00000158050 327 ntBASIC9.33□□□□□ -0.92
Ccl6P27784 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC9.33□□□□□ -0.92
Ccl6P27784 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
Ccl6P27784 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ccl6P27784 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Ccl6P27784 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC9.33□□□□□ -0.92
Ccl6P27784 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC9.33□□□□□ -0.92
Ccl6P27784 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC9.33□□□□□ -0.92
Ccl6P27784 Gm38266-201ENSMUST00000194931 421 ntBASIC9.33□□□□□ -0.92
Ccl6P27784 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC9.33□□□□□ -0.92
Ccl6P27784 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Ccl6P27784 AC154222.2-201ENSMUST00000225848 607 ntBASIC9.33□□□□□ -0.92
Ccl6P27784 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ccl6P27784 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Ccl6P27784 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ccl6P27784 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ccl6P27784 Gm10312-201ENSMUST00000078515 489 ntBASIC9.33□□□□□ -0.92
Ccl6P27784 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ccl6P27784 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Ccl6P27784 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ccl6P27784 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC9.33□□□□□ -0.92
Ccl6P27784 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ccl6P27784 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ccl6P27784 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ccl6P27784 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ccl6P27784 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Ccl6P27784 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Ccl6P27784 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ccl6P27784 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ccl6P27784 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ccl6P27784 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Ccl6P27784 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ccl6P27784 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ccl6P27784 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Ccl6P27784 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC9.32□□□□□ -0.92
Ccl6P27784 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Ccl6P27784 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Ccl6P27784 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC9.32□□□□□ -0.92
Ccl6P27784 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Ccl6P27784 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Ccl6P27784 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Ccl6P27784 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Ccl6P27784 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Ccl6P27784 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Ccl6P27784 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Ccl6P27784 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Ccl6P27784 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Ccl6P27784 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Ccl6P27784 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Ccl6P27784 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Ccl6P27784 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC9.32□□□□□ -0.92
Ccl6P27784 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
Ccl6P27784 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Ccl6P27784 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC9.32□□□□□ -0.92
Ccl6P27784 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC9.32□□□□□ -0.92
Ccl6P27784 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC9.32□□□□□ -0.92
Ccl6P27784 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Ccl6P27784 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Ccl6P27784 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Ccl6P27784 Gm42599-201ENSMUST00000201308 469 ntBASIC9.32□□□□□ -0.92
Ccl6P27784 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC9.32□□□□□ -0.92
Ccl6P27784 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Ccl6P27784 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC9.32□□□□□ -0.92
Ccl6P27784 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Ccl6P27784 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Ccl6P27784 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Ccl6P27784 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Ccl6P27784 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Ccl6P27784 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC9.32□□□□□ -0.92
Ccl6P27784 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Ccl6P27784 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Ccl6P27784 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Ccl6P27784 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC9.32□□□□□ -0.92
Ccl6P27784 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Ccl6P27784 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Ccl6P27784 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
Ccl6P27784 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Ccl6P27784 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Ccl6P27784 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms