Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd40lgP27548 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cd40lgP27548 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.11□□□□□ -0.63
Cd40lgP27548 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cd40lgP27548 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cd40lgP27548 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.11□□□□□ -0.63
Cd40lgP27548 Gm37259-201ENSMUST00000193903 849 ntBASIC11.11□□□□□ -0.63
Cd40lgP27548 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.11□□□□□ -0.63
Cd40lgP27548 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.11□□□□□ -0.63
Cd40lgP27548 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cd40lgP27548 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd40lgP27548 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.11□□□□□ -0.63
Cd40lgP27548 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd40lgP27548 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd40lgP27548 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.11□□□□□ -0.63
Cd40lgP27548 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cd40lgP27548 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd40lgP27548 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd40lgP27548 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.11□□□□□ -0.63
Cd40lgP27548 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cd40lgP27548 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cd40lgP27548 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cd40lgP27548 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd40lgP27548 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.11□□□□□ -0.63
Cd40lgP27548 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd40lgP27548 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Cd40lgP27548 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd40lgP27548 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd40lgP27548 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Cd40lgP27548 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.1□□□□□ -0.63
Cd40lgP27548 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd40lgP27548 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd40lgP27548 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd40lgP27548 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.1□□□□□ -0.63
Cd40lgP27548 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cd40lgP27548 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Cd40lgP27548 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd40lgP27548 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cd40lgP27548 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd40lgP27548 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd40lgP27548 Gm24830-201ENSMUST00000102024 166 ntBASIC11.1□□□□□ -0.63
Cd40lgP27548 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cd40lgP27548 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Cd40lgP27548 Gm13665-201ENSMUST00000120830 528 ntBASIC11.1□□□□□ -0.63
Cd40lgP27548 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cd40lgP27548 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.1□□□□□ -0.63
Cd40lgP27548 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.1□□□□□ -0.63
Cd40lgP27548 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd40lgP27548 Gm25890-201ENSMUST00000177643 165 ntBASIC11.1□□□□□ -0.63
Cd40lgP27548 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.1□□□□□ -0.63
Cd40lgP27548 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.1□□□□□ -0.63
Cd40lgP27548 Gm22614-201ENSMUST00000178300 165 ntBASIC11.1□□□□□ -0.63
Cd40lgP27548 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cd40lgP27548 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.1□□□□□ -0.63
Cd40lgP27548 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd40lgP27548 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd40lgP27548 Gm22042-201ENSMUST00000082989 165 ntBASIC11.1□□□□□ -0.63
Cd40lgP27548 Gm26232-201ENSMUST00000083360 166 ntBASIC11.1□□□□□ -0.63
Cd40lgP27548 Gm24136-201ENSMUST00000083374 165 ntBASIC11.1□□□□□ -0.63
Cd40lgP27548 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.1□□□□□ -0.63
Cd40lgP27548 Gm26110-201ENSMUST00000083971 165 ntBASIC11.1□□□□□ -0.63
Cd40lgP27548 Mir433-201ENSMUST00000093564 124 ntBASIC11.1□□□□□ -0.63
Cd40lgP27548 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Cd40lgP27548 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cd40lgP27548 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Cd40lgP27548 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Cd40lgP27548 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd40lgP27548 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cd40lgP27548 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.1□□□□□ -0.63
Cd40lgP27548 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.1□□□□□ -0.63
Cd40lgP27548 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd40lgP27548 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.1□□□□□ -0.63
Cd40lgP27548 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.1□□□□□ -0.63
Cd40lgP27548 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd40lgP27548 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd40lgP27548 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cd40lgP27548 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Cd40lgP27548 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cd40lgP27548 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cd40lgP27548 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd40lgP27548 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd40lgP27548 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.09□□□□□ -0.63
Cd40lgP27548 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Cd40lgP27548 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cd40lgP27548 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd40lgP27548 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd40lgP27548 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.09□□□□□ -0.63
Cd40lgP27548 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd40lgP27548 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd40lgP27548 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.09□□□□□ -0.63
Cd40lgP27548 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd40lgP27548 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd40lgP27548 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd40lgP27548 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd40lgP27548 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd40lgP27548 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Cd40lgP27548 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd40lgP27548 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd40lgP27548 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd40lgP27548 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms