Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clk1P22518 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clk1P22518 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Clk1P22518 AC160340.2-201ENSMUST00000220812 3675 ntBASIC11.27□□□□□ -0.61
Clk1P22518 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Clk1P22518 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clk1P22518 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.27□□□□□ -0.61
Clk1P22518 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clk1P22518 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Clk1P22518 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Clk1P22518 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.27□□□□□ -0.61
Clk1P22518 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Clk1P22518 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clk1P22518 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Clk1P22518 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Clk1P22518 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clk1P22518 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clk1P22518 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Clk1P22518 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Clk1P22518 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Clk1P22518 Gm8036-201ENSMUST00000118089 1718 ntBASIC11.26□□□□□ -0.61
Clk1P22518 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clk1P22518 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.26□□□□□ -0.61
Clk1P22518 Ttk-202ENSMUST00000185913 2731 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Clk1P22518 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clk1P22518 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Clk1P22518 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.26□□□□□ -0.61
Clk1P22518 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clk1P22518 Gm14999-201ENSMUST00000121039 624 ntBASIC11.26□□□□□ -0.61
Clk1P22518 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Clk1P22518 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clk1P22518 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.26□□□□□ -0.61
Clk1P22518 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.26□□□□□ -0.61
Clk1P22518 Gm2546-201ENSMUST00000182630 991 ntBASIC11.26□□□□□ -0.61
Clk1P22518 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.26□□□□□ -0.61
Clk1P22518 Gm27572-201ENSMUST00000183702 255 ntBASIC11.26□□□□□ -0.61
Clk1P22518 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.26□□□□□ -0.61
Clk1P22518 Gm42693-201ENSMUST00000196779 631 ntBASIC11.26□□□□□ -0.61
Clk1P22518 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Clk1P22518 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.26□□□□□ -0.61
Clk1P22518 Gm44882-201ENSMUST00000205702 802 ntBASIC11.26□□□□□ -0.61
Clk1P22518 Olfr284-202ENSMUST00000206647 966 ntBASIC11.26□□□□□ -0.61
Clk1P22518 Gm18935-201ENSMUST00000212692 664 ntBASIC11.26□□□□□ -0.61
Clk1P22518 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.26□□□□□ -0.61
Clk1P22518 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.26□□□□□ -0.61
Clk1P22518 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clk1P22518 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clk1P22518 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clk1P22518 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.26□□□□□ -0.61
Clk1P22518 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.26□□□□□ -0.61
Clk1P22518 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clk1P22518 Dqx1-201ENSMUST00000077502 3257 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Clk1P22518 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clk1P22518 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clk1P22518 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Clk1P22518 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clk1P22518 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clk1P22518 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Clk1P22518 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.26□□□□□ -0.61
Clk1P22518 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Clk1P22518 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clk1P22518 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clk1P22518 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Clk1P22518 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clk1P22518 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Clk1P22518 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Clk1P22518 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Clk1P22518 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Clk1P22518 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Clk1P22518 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Clk1P22518 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Clk1P22518 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Clk1P22518 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Clk1P22518 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Clk1P22518 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Clk1P22518 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Clk1P22518 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Clk1P22518 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Clk1P22518 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Clk1P22518 Gm12241-201ENSMUST00000118330 726 ntBASIC11.25□□□□□ -0.61
Clk1P22518 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Clk1P22518 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Clk1P22518 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Clk1P22518 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Clk1P22518 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.25□□□□□ -0.61
Clk1P22518 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.25□□□□□ -0.61
Clk1P22518 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Clk1P22518 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Clk1P22518 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Clk1P22518 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Clk1P22518 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Clk1P22518 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Clk1P22518 Ovgp1-201ENSMUST00000000573 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Clk1P22518 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.25□□□□□ -0.61
Clk1P22518 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
Clk1P22518 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Clk1P22518 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Clk1P22518 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Clk1P22518 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Clk1P22518 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms