Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.52□□□□□ -0.56
BdnfP21237 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
BdnfP21237 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
BdnfP21237 Gm7340-201ENSMUST00000119729 2752 ntBASIC11.52□□□□□ -0.56
BdnfP21237 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
BdnfP21237 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
BdnfP21237 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
BdnfP21237 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
BdnfP21237 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
BdnfP21237 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
BdnfP21237 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
BdnfP21237 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
BdnfP21237 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
BdnfP21237 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
BdnfP21237 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
BdnfP21237 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
BdnfP21237 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.52□□□□□ -0.57
BdnfP21237 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.52□□□□□ -0.57
BdnfP21237 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
BdnfP21237 Gm16379-201ENSMUST00000161469 348 ntBASIC11.52□□□□□ -0.57
BdnfP21237 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.52□□□□□ -0.57
BdnfP21237 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.52□□□□□ -0.57
BdnfP21237 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
BdnfP21237 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.52□□□□□ -0.57
BdnfP21237 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.52□□□□□ -0.57
BdnfP21237 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.52□□□□□ -0.57
BdnfP21237 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.52□□□□□ -0.57
BdnfP21237 Gm9136-201ENSMUST00000193368 454 ntBASIC11.52□□□□□ -0.57
BdnfP21237 Gm8762-201ENSMUST00000193486 339 ntBASIC11.52□□□□□ -0.57
BdnfP21237 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
BdnfP21237 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
BdnfP21237 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
BdnfP21237 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
BdnfP21237 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.52□□□□□ -0.57
BdnfP21237 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
BdnfP21237 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.52□□□□□ -0.57
BdnfP21237 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
BdnfP21237 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
BdnfP21237 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.52□□□□□ -0.57
BdnfP21237 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
BdnfP21237 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
BdnfP21237 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
BdnfP21237 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
BdnfP21237 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
BdnfP21237 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.52□□□□□ -0.57
BdnfP21237 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
BdnfP21237 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
BdnfP21237 AC140462.2-201ENSMUST00000225718 2433 ntBASIC11.51□□□□□ -0.57
BdnfP21237 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
BdnfP21237 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
BdnfP21237 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
BdnfP21237 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
BdnfP21237 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
BdnfP21237 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
BdnfP21237 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
BdnfP21237 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
BdnfP21237 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
BdnfP21237 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
BdnfP21237 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
BdnfP21237 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.51□□□□□ -0.57
BdnfP21237 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
BdnfP21237 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
BdnfP21237 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
BdnfP21237 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.51□□□□□ -0.57
BdnfP21237 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.51□□□□□ -0.57
BdnfP21237 Gm24830-201ENSMUST00000102024 166 ntBASIC11.51□□□□□ -0.57
BdnfP21237 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
BdnfP21237 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
BdnfP21237 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
BdnfP21237 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
BdnfP21237 Gm15824-201ENSMUST00000119516 955 ntBASIC11.51□□□□□ -0.57
BdnfP21237 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.51□□□□□ -0.57
BdnfP21237 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
BdnfP21237 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.51□□□□□ -0.57
BdnfP21237 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
BdnfP21237 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.51□□□□□ -0.57
BdnfP21237 Gm44958-201ENSMUST00000203734 736 ntBASIC11.51□□□□□ -0.57
BdnfP21237 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
BdnfP21237 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.51□□□□□ -0.57
BdnfP21237 Gm26232-201ENSMUST00000083360 166 ntBASIC11.51□□□□□ -0.57
BdnfP21237 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.51□□□□□ -0.57
BdnfP21237 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
BdnfP21237 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.51□□□□□ -0.57
BdnfP21237 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
BdnfP21237 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
BdnfP21237 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
BdnfP21237 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
BdnfP21237 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
BdnfP21237 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
BdnfP21237 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
BdnfP21237 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
BdnfP21237 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.51□□□□□ -0.57
BdnfP21237 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
BdnfP21237 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.51□□□□□ -0.57
BdnfP21237 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
BdnfP21237 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
BdnfP21237 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
BdnfP21237 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
BdnfP21237 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
BdnfP21237 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms