Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx1P18111 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx1P18111 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx1P18111 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx1P18111 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Cdx1P18111 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC9.71□□□□□ -0.86
Cdx1P18111 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC9.71□□□□□ -0.86
Cdx1P18111 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx1P18111 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx1P18111 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx1P18111 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx1P18111 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx1P18111 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Cdx1P18111 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC9.71□□□□□ -0.86
Cdx1P18111 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx1P18111 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx1P18111 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx1P18111 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
Cdx1P18111 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx1P18111 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx1P18111 Gm10339-203ENSMUST00000225409 1671 ntBASIC9.71□□□□□ -0.86
Cdx1P18111 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC9.7□□□□□ -0.86
Cdx1P18111 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Cdx1P18111 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC9.7□□□□□ -0.86
Cdx1P18111 Gm43267-201ENSMUST00000199664 1796 ntBASIC9.7□□□□□ -0.86
Cdx1P18111 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 AC154171.2-201ENSMUST00000225219 2652 ntBASIC9.7□□□□□ -0.86
Cdx1P18111 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 Gm37954-201ENSMUST00000195400 2071 ntBASIC9.7□□□□□ -0.86
Cdx1P18111 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC9.7□□□□□ -0.86
Cdx1P18111 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Cdx1P18111 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Cdx1P18111 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Cdx1P18111 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Cdx1P18111 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC9.7□□□□□ -0.86
Cdx1P18111 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
Cdx1P18111 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 Gm4271-201ENSMUST00000174444 973 ntBASIC9.7□□□□□ -0.86
Cdx1P18111 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Cdx1P18111 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC9.7□□□□□ -0.86
Cdx1P18111 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC9.7□□□□□ -0.86
Cdx1P18111 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC9.7□□□□□ -0.86
Cdx1P18111 Gm17870-201ENSMUST00000219489 1174 ntBASIC9.7□□□□□ -0.86
Cdx1P18111 Gm9257-201ENSMUST00000221254 232 ntBASIC9.7□□□□□ -0.86
Cdx1P18111 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Cdx1P18111 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Cdx1P18111 Gm9755-201ENSMUST00000032981 1356 ntBASIC9.7□□□□□ -0.86
Cdx1P18111 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC9.7□□□□□ -0.86
Cdx1P18111 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC9.7□□□□□ -0.86
Cdx1P18111 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC9.7□□□□□ -0.86
Cdx1P18111 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Cdx1P18111 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC9.7□□□□□ -0.86
Cdx1P18111 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC9.7□□□□□ -0.86
Cdx1P18111 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC9.7□□□□□ -0.86
Cdx1P18111 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Cdx1P18111 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 Gm36940-201ENSMUST00000194281 2036 ntBASIC9.7□□□□□ -0.86
Cdx1P18111 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC9.7□□□□□ -0.86
Cdx1P18111 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC9.7□□□□□ -0.86
Cdx1P18111 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC9.7□□□□□ -0.86
Cdx1P18111 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cdx1P18111 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cdx1P18111 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC9.69□□□□□ -0.86
Cdx1P18111 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cdx1P18111 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Cdx1P18111 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms